| New model in OGS2.0 | DPOGS211868 |
|---|---|
| Genomic Position | scaffold127:- 232368-236610 |
| See gene structure | |
| CDS Length | 1086 |
| Paired RNAseq reads | 598 |
| Single RNAseq reads | 1335 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001239 (6e-84) |
| Best Drosophila hit | CG6907 (2e-34) |
| Best Human hit | elongator complex protein 4 (1e-58) |
| Best NR hit (blastp) | elongation protein 4-like protein [Bombyx mori] (8e-121) |
| Best NR hit (blastx) | elongation protein 4-like protein [Bombyx mori] (4e-116) |
| GeneOntology terms | GO:0033588 Elongator holoenzyme complex GO:0006357 regulation of transcription from RNA polymerase II promoter GO:0045449 regulation of transcription GO:0005634 nucleus GO:0006350 transcription |
| InterPro families | IPR008728 Elongator complex protein 4 |
| Orthology group | MCL13564 |
Nucleotide sequence:
ATGTCGAGTTTTCAAAAAGCAGTTCCTCGATCTAGTTTAAGTGGTACAAAATTAAAAAAT
AACATTCCCTATGTATCTTCCGGAATACCATCCTTGGACTTTATAGTCGGAGGTGGCCTA
CCTCTCGGTTCTATTTTCGCCGTAGAGGAAGATGTCTTAGGCAGTTATAGCAGAGTTCTC
TCAAAGTATTTCCTAGCTGAAGGAGTTGTGTGTAAACATGGCTTATTTGTTGCTTCTGCA
GATGAAAATCCCAAGTTAATTATCCAAGAGCTCCCCACACCCTGTACAGTACAAGAAGAC
AAAACAAATCAAGATGTTAACAGTGAGATGAAAATCGCCTGGAGGTATGAAGGTCTGGGC
CAAGTGGAGTCATCGTTTGGAAGCAACACCAACTTCGGCCATCACTTTGATCTAAGCAGG
CACATGGAGGAGCTGGCTCTTAGAGATGTTGATTTAACTTATTGTCACTTGAAACCGAAC
AATGGAAAGAGCAATGGGTTTAGGAACCGTCTGTATCATGATCTGTTGAAAGAAATCGGA
AAGGTTTTATCCAAAGAAGAATATCGGAGCGGTAGTAAAAACAAAAATATACTTCGGATC
AGCATTCAGTGTCTGGGTTCGCCTGTGTGGTTGGCCACTGACTGTGACCATGACAGCAAG
TACGGACAGGATCTCATTAAGTTGATATATAGCTTAAGGGTTCTGATCAGAGACACCAAT
GCAGTTGTCTTCATCACAATTCCCGAGCATCTGTTTGAAAATAATCAAATAATGAAGAGG
CTTCTCTACTCTATCGACAACGCGGTGCGGATCGAGTCGTTCGCCGGTTCCAGTAAGGAG
ACCAACCCGGTGTACAGCGAGTACCACGGGCTGTTCCACATCAGCAAGTTGTCGGGGGTC
AGCTCCCTGGTGGCGTTCGTTCCTCCCAGCCTGGACCTGGCCTTCAAGCTGAAGAGGAAG
AAGTTTGTCATCGAAAAGTTGCACCTGCCGCCAGAACTCCAAGAGTCCAGCGAGCGCGAG
CAGGACGACGTCACGGCCACGCCCGGCACCTGCGGCGGCTTCAAGAAGAAAGATATAGAC
TTCTAA
Protein sequence:
MSSFQKAVPRSSLSGTKLKNNIPYVSSGIPSLDFIVGGGLPLGSIFAVEEDVLGSYSRVL
SKYFLAEGVVCKHGLFVASADENPKLIIQELPTPCTVQEDKTNQDVNSEMKIAWRYEGLG
QVESSFGSNTNFGHHFDLSRHMEELALRDVDLTYCHLKPNNGKSNGFRNRLYHDLLKEIG
KVLSKEEYRSGSKNKNILRISIQCLGSPVWLATDCDHDSKYGQDLIKLIYSLRVLIRDTN
AVVFITIPEHLFENNQIMKRLLYSIDNAVRIESFAGSSKETNPVYSEYHGLFHISKLSGV
SSLVAFVPPSLDLAFKLKRKKFVIEKLHLPPELQESSEREQDDVTATPGTCGGFKKKDID
F