| New model in OGS2.0 | DPOGS211879 |
|---|---|
| Genomic Position | scaffold127:- 89073-91667 |
| See gene structure | |
| CDS Length | 846 |
| Paired RNAseq reads | 2003 |
| Single RNAseq reads | 5074 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001252 (4e-128) |
| Best Drosophila hit | mitochondrial ribosomal protein L28 (1e-70) |
| Best Human hit | 39S ribosomal protein L28, mitochondrial precursor (3e-30) |
| Best NR hit (blastp) | mitochondrial ribosomal protein L28 [Simulium vittatum] (2e-84) |
| Best NR hit (blastx) | mitochondrial ribosomal protein L28 [Simulium vittatum] (1e-80) |
| GeneOntology terms | GO:0005762 mitochondrial large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0006396 RNA processing GO:0000175 3'-5'-exoribonuclease activity GO:0003723 RNA binding |
| InterPro families | ND |
| Orthology group | MCL14665 |
Nucleotide sequence:
ATGGCTTCATCTCGCATTCAGGCAACAGTACGCCAGCTGTCCAAAACTTACAAGAAGAAA
ACGAGATTTGAAATCGGTATAGCTACAGAGTTACCTACCGCTTATAAGAAGTTTTGGCGA
GAATGGAAAGTACTGAAACCAGCTGCGGTGCATTTTATTCCACAAGAGAGCAAGTGGAAG
CGGGATGATATTACTGGTGAAACGTTGCCCGTTCAGAACATCCCGTTACCATTAAAGTAC
CCAGCGGAGATTCATGAGGGAATATGGGGTGGCGAGGCTGTTATTAAAGGTTTTCAAAAG
CGAGATCCGAACAGACGCAGAGTTCCCCACTACTGGGTGCCTGTCCTAAAGAGGACTGTA
GTCAAATCTGAAGTTCTGAACACACATTTATCAGTCACTGTCACCGATAGAACCATTAAA
TTAATCAATGACCACTATGGATTTGACCATTATCTGCTTAAGACGCCCGCCTGTGATCTG
GTCTCCATGCTAGCATTGAAACTTAAGAAACAAATACTTACCGAACTCATGAACGGATGC
CCTAGACATGCTAACAATCCAGAGAAACAAAAAAGTGTTTATGAGGAATATAAGACCTAT
TTATCTTCGTACACACCCGAGGAAATAGAATGGTATGGTCTCACTTGGTACGAAGCGCTC
AACAAAGTCGCTAAACTGAAGGAGGCCGCAAATAAACCGGTGCCTTTGAAACATATGTAC
AGGAAAAAACTTATAGAGAACCTGCAAGCTAAAGAGAGCCAGAATGATACCAGCACTTCG
GATATAGCATCCACGACCTCCTGGCTAGCCAAAATGAATCCGTTCGGCAAGAAGGATGAA
GCATAG
Protein sequence:
MASSRIQATVRQLSKTYKKKTRFEIGIATELPTAYKKFWREWKVLKPAAVHFIPQESKWK
RDDITGETLPVQNIPLPLKYPAEIHEGIWGGEAVIKGFQKRDPNRRRVPHYWVPVLKRTV
VKSEVLNTHLSVTVTDRTIKLINDHYGFDHYLLKTPACDLVSMLALKLKKQILTELMNGC
PRHANNPEKQKSVYEEYKTYLSSYTPEEIEWYGLTWYEALNKVAKLKEAANKPVPLKHMY
RKKLIENLQAKESQNDTSTSDIASTTSWLAKMNPFGKKDEA