New model in OGS2.0 | DPOGS211884  |
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Genomic Position | scaffold127:- 21059-22894 |
See gene structure | |
CDS Length | 480 |
Paired RNAseq reads   | 15 |
Single RNAseq reads   | 47 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA001258 (2e-22) |
Best Drosophila hit   | CG1599 (2e-17) |
Best Human hit | vesicle-associated membrane protein 7 isoform 1 (2e-16) |
Best NR hit (blastp)   | PREDICTED: similar to synaptobrevin [Tribolium castaneum] (9e-22) |
Best NR hit (blastx)   | PREDICTED: similar to synaptobrevin [Tribolium castaneum] (1e-21) |
GeneOntology terms    | GO:0006886 intracellular protein transport GO:0005484 SNAP receptor activity GO:0005886 plasma membrane GO:0016021 integral to membrane GO:0016192 vesicle-mediated transport |
InterPro families    | IPR010908 Longin IPR011012 Longin-like |
Orthology group | ND |
Nucleotide sequence:
ATGCCTATACTATACAGTGCCGTGGCCTACAAGAGGAGAGTTCTGCACCGACACGCGTGT
TGCGATGGTAACTTCGATGAGGTTTTAAGTGATGTTATCAACAAGGTACCGACCGACGAC
CACCGCGTCACCTACTACCATAAGAGACATCTCCTCCATGTGGTAATGGAGAGTGAGCAT
TTCTATTTCTGCATAACGGATAAGCTGTGTCAAAGGTCGAGGGCGTTTCTGTTCCTAAAG
GAAATAAAGAGGAGGTTTTGTTCCGACAAATGCGGTTTTAGAGACGCGCTCGCTGACCTT
ATGACGTACTACAATGACGACGGCAATGCCATCAGCATTGATAGCGGAGACATTGACGAG
ATAAACGCCATACGAGTGGAGAGTAGCGAGAGTGTCCTCGGGGAGACAATACTGCTCGTG
AGGAGCGAGCACTGTTTGGAATATCCCAGTGTATCCCGCGTGGACAAAAAACCGGAATAG
Protein sequence:
MPILYSAVAYKRRVLHRHACCDGNFDEVLSDVINKVPTDDHRVTYYHKRHLLHVVMESEH
FYFCITDKLCQRSRAFLFLKEIKRRFCSDKCGFRDALADLMTYYNDDGNAISIDSGDIDE
INAIRVESSESVLGETILLVRSEHCLEYPSVSRVDKKPE