| New model in OGS2.0 | DPOGS211886 |
|---|---|
| Genomic Position | scaffold127:- 2517-6179 |
| See gene structure | |
| CDS Length | 660 |
| Paired RNAseq reads | 361 |
| Single RNAseq reads | 1233 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001258 (1e-112) |
| Best Drosophila hit | CG1599 (2e-76) |
| Best Human hit | vesicle-associated membrane protein 7 isoform 1 (4e-69) |
| Best NR hit (blastp) | synaptobrevin [Bombyx mori] (4e-110) |
| Best NR hit (blastx) | synaptobrevin [Bombyx mori] (4e-104) |
| GeneOntology terms | GO:0006886 intracellular protein transport GO:0005484 SNAP receptor activity GO:0005886 plasma membrane GO:0016021 integral to membrane GO:0016192 vesicle-mediated transport |
| InterPro families | IPR010908 Longin IPR001388 Synaptobrevin IPR011012 Longin-like |
| Orthology group | MCL14801 |
Nucleotide sequence:
ATGCCAATTTTATTTAGTGTGGTTGCTCGTGGAACAGTAGTATTAGCAAAATATGCAACG
TGTGCCGGAAATTTCACCGAAGTTACAGAACAAATACTATCGAAAATTCCGCCCCACGAT
GACAAACTTACCTACTCTCACGGAAATTACCTCTTTCATTACATTGCTGAAAACAAGCTT
GTATATTTCTGCATTACCGACGACAAATTCCAACGTTCGAGAGCATTCCTATTTCTGAAC
GAGATCAAAAGGAGGTTTATAACATCATTTGGGGACACAGCGCAAACCGCTATACCATAT
GCAATGAACAGTGAATTCGCTAGAATCCTTGCAACAGAAATGAAGCACTACAGTGACTCG
AAAGATCTAGAAGCCATATCCAGAGTACACGGAGAGCTGGATGAGCTTAAAAATATCATG
GTCAAAAACATAGATAGCATGGCAATGCGAGGTGAAAAACTGGAGTTGCTCGTTAACAAG
GCGGATAATCTGGCCACCAGCTCTGTATCATATCGAACGTCAGCGAGGACGTTGCAGCGC
TCGTTGTTCTGGAAAAACATGAAGATGTACTTCATCCTAGCGGTGATAGCTGCGTTCGCA
ATATATTTGATAGGAGCCATGGCGTGCGGCGGACTGGCCTGGAAATCGTGTGTCGCTTAA
Protein sequence:
MPILFSVVARGTVVLAKYATCAGNFTEVTEQILSKIPPHDDKLTYSHGNYLFHYIAENKL
VYFCITDDKFQRSRAFLFLNEIKRRFITSFGDTAQTAIPYAMNSEFARILATEMKHYSDS
KDLEAISRVHGELDELKNIMVKNIDSMAMRGEKLELLVNKADNLATSSVSYRTSARTLQR
SLFWKNMKMYFILAVIAAFAIYLIGAMACGGLAWKSCVA