| New model in OGS2.0 | DPOGS215442 |
|---|---|
| Genomic Position | scaffold2259:- 10080-30441 |
| See gene structure | |
| CDS Length | 1608 |
| Paired RNAseq reads | 130 |
| Single RNAseq reads | 386 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | munin (3e-57) |
| Best Human hit | GDNF family receptor alpha-like precursor (6e-06) |
| Best NR hit (blastp) | PREDICTED: similar to munin CG33518-PA [Tribolium castaneum] (2e-69) |
| Best NR hit (blastx) | PREDICTED: similar to munin CG33518-PA [Tribolium castaneum] (1e-70) |
| GeneOntology terms | GO:0008150 biological_process GO:0016167 glial cell line-derived neurotrophic factor receptor activity GO:0016020 membrane |
| InterPro families | IPR016017 GDNF/GAS1 |
| Orthology group | MCL10546 |
Nucleotide sequence:
ATGATATTTATCAATACATATTATAAAACGCGGTCCCTCGCCGCGTCTGTCTCTTTATTC
GCGATAAACGGAAAAGCTACTGCACCAATTGTCAAGCGGTTACCACAACTCGAAGTTGCC
TGCTCTACCGTGACCGTTACCAAGTGTCAAGCCGCTCTCCGAACTCTGCAAGCGTTTCCA
TTCTTTAAACCGACTTGCCTCTGTCGAGAACCGAACGTCGATCCAGAATGCAACTCCTTC
CGCGACTTCCTATTCGATCATCCCTGCGTTTTCGTGATGAAAAAAGAGAAAGATCCCTAT
CCCGTGGAGACTCTGCCAACTTGCACCTATGCTTTAAGTGTTTGCCACAACGAGAAAGCT
TGTTCCGTGCTCTTCGAGAGATTCAAGAACGCTTGTAAAGCCAGAGACGGGGAGTGTCGT
ATGGAGGAGAGGGAATCCTGCCGCGAGGCCTGGGCCGGTCTTCGGCTTTCTCCACTCTTC
GGCTGCATCTGCCCCAACACCCACATGAAGAAGAGATGTGATAGGATTTTCGCTGTCGTG
AACCACAACCCGTGCGTCGTAAAGCTGATATCTGACGGACGGACGGCAAATCGAAACACC
ACGGCGGTGACGTCATGGATTGGTGGTATGTCCATAACGCAGGACGGCAACCTTATCACT
CCGGACAAATTAATGACACACGTACACCGTTATGCAAGCCCCCACTACAGGCCCCATGGG
CACCATTACCACCATTGGAATCATGAGCCAGGGGGAAGTGAAGATCCTCTATACGCTACC
AAGACAGTCTACGGACCAGGCTACATCGATGAAAACCAGAGGATTGGCAAAGAAAACGGT
AAAGCAGGTTATGAAAAGGTGGCCCTTCAATCGACCTGTCACGTTGCATTGGACGCATGC
ATAAAGGATACGGACTGCGTGACGTCACTCACGCCCGTGCTTCAAAAATGTCACTCAACC
GACTGCGATAGGGAGGGATGTATGTCAGCGTTGAGGGGATTCTATAGGAAGCCTGGTGTA
CATTGGAACACGGAAATCGCATTCTGTCTCTGCAAGAAAACGGATAACAAGGAAGACTCG
TGCATGAATGCCCAAGAGAGATTACACCCATCTTGCGCCCAACGACCAGCTGTCGGTTCA
CCGCTTCCCGCCTGTCATACCCTGGCCCACGCGTGTCGAGAGGAACCCGAATGCAGAATC
CGCCTGGAAAACTACGAGCAATGGTGTGCCGTGGATGCCGTGACGCAAGGCTGTGCTGGA
TCTCCAGCAGCGTGCCGAGCGGCTGTTGTAGCTGTTCTGGGTACTCAGCTAAGAGCTGCC
TGCGCCTGCAGAGGAACTGATTTTGCCCAGCTCTACGATTGCCTTGGATGGCAGAGATTG
TTATGGCTCAATCCATGTGTTGTGGAATCTCAAAGCGATTACCACGTCAAAACCTACGGA
GCCCTGCATACAACTACTCCATTCGACAACGGCGTCAGATACATGACAGTACCACCAGAG
CCAGCAGTTCATCATCATACCACCTCACACCACCACAAGCATACAACCCAGCACGGCACG
TCGCAAGTTGACGTTATGCAGGTTAAACTACATTCGGACTTGTCTTAA
Protein sequence:
MIFINTYYKTRSLAASVSLFAINGKATAPIVKRLPQLEVACSTVTVTKCQAALRTLQAFP
FFKPTCLCREPNVDPECNSFRDFLFDHPCVFVMKKEKDPYPVETLPTCTYALSVCHNEKA
CSVLFERFKNACKARDGECRMEERESCREAWAGLRLSPLFGCICPNTHMKKRCDRIFAVV
NHNPCVVKLISDGRTANRNTTAVTSWIGGMSITQDGNLITPDKLMTHVHRYASPHYRPHG
HHYHHWNHEPGGSEDPLYATKTVYGPGYIDENQRIGKENGKAGYEKVALQSTCHVALDAC
IKDTDCVTSLTPVLQKCHSTDCDREGCMSALRGFYRKPGVHWNTEIAFCLCKKTDNKEDS
CMNAQERLHPSCAQRPAVGSPLPACHTLAHACREEPECRIRLENYEQWCAVDAVTQGCAG
SPAACRAAVVAVLGTQLRAACACRGTDFAQLYDCLGWQRLLWLNPCVVESQSDYHVKTYG
ALHTTTPFDNGVRYMTVPPEPAVHHHTTSHHHKHTTQHGTSQVDVMQVKLHSDLS