| Genomic Position | scaffold5520:+ 2219-3694 |
|---|---|
| See gene structure | |
| CDS Length | 1476 |
| Paired RNAseq reads | 18 |
| Single RNAseq reads | 67 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011163 (4e-08) |
| Best Drosophila hit | ND |
| Best Human hit | ND |
| Best NR hit (blastp) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | endonuclease-reverse transcriptase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0003964 RNA-directed DNA polymerase activity GO:0006278 RNA-dependent DNA replication GO:0005622 intracellular GO:0008270 zinc ion binding GO:0003723 RNA binding |
| InterPro families | IPR000477 Reverse transcriptase |
| Orthology group | MCL10020 |
Nucleotide sequence:
ATGCCGGCAGTCCTTTCAGAAGTGGAAGACTTCTATAGCCGGCTCTACGCATCGCAGACA
TCTCGGCCTGATCCCGTGTGTGAGGATCCTAGAGCCACATTAACACGCCACTTTTCCGGA
TACCTGCCAGAAGTCAGCATTGGCGAAATCGAGATCGCTCTTGGGCAGCCTAAAAATGGA
AAAGCCCCTGGAGAGGACGGCATAACAACAGAATTGTTGAATGCCGGAGGTAAACCCGTA
CAGAGGGAGCTCCAAAAGCTGTTCAATTCTGTCCTCTTCGAAGGGAAAACTCCGGAGGCG
TGGAGTAGGGGTGTGGTCATCCTGTTCTTCAAAAAGGGAGACAAATCCCTGCTGAAGAAC
TATCGACCCATTTCCCTGCTAAGCCACGTCTATAAGCTGTTTTCAAGAGTGATCACAAAT
CGTCTTGCGCGAAGACTCGACGAATTCCAACCACCGGAACAGGCTGGGTTTCGGAGCGGA
TACGGCACCATAGACCACATTCACACGGTGCGGCAGATTATACAGAAGACCGAAGAGTAT
AATCAGCCCCTTTGTCTAGCATTCGTGGACTATGAGAAAGCTTTTGACTCGATTGAAACT
TGGTCTGTTCTGGAGTCCCTGCAACGTTGCCAAGTTGATTGGCGGTATATCCAAGTGATA
AGATGTCTCTACGAAGCCGCCACCATGTCCGTCCAAGTACAGAATCAGCAAACAAGTCCC
ATACCGTTGCATCGAGGAGTGAGACAGGGGGACGTTATCTCCCCGAAACTGTTCACAAAT
GCAATGGAGGATATGTTTAAGACGCTGCGCTGGAAAGGACGAGGTATTAACATTAATGGC
GAACACATCTCTCACTTGCGATTTGCAGACGACATCGTCATTATGGCAGAAACGCTGCAG
GACCTACAACAGATGCTTGATGACCTGGCTGACTCTTCTATACGCATCGGCCTACGGATG
AACTTGGACAAAACCAAGGTCATGTTCAATGAACATGTTCTACCGGAACCGATTGCAGTC
CACGGTGTCGTTCTCGAAGTTGTTCAAAAATATGTCTATCTGGGGCAAGTATTATTGCGT
TGGGTAGAAAATTTCGAGGACGAGGTGAGTAGAAGAGTTCGGCTGGGTTGGGTAGCGTTT
GGGAAGTTACGCCGAGTCTTAACATCGTCGATCCCACAATGCCTAAAGACGAAAGTCTTC
AATCAGTGCGTCCTACCCGGTATGACTTACGGTGCCGAAACGTGGACACTAACGGTACGG
CTAGTTCATCAACTCAAAGTCGCTCAGCGAGCTATGGAAAGGGCTATGCTCGGCGTTTCT
CTGCGGGATCGCATCAGAAATGAGGTGTTTCGGCAGAGAACCAAAGTCATCGACATAGCC
CACCGGATTAGCAAGCTGAAGTGGCAGTGGGCTGGCCATAAATTTGGGGTAAACGAGTTC
TTAAGTGGAGACAGCGCCTCGGCAAACGTAGTGTAG
Protein sequence:
MPAVLSEVEDFYSRLYASQTSRPDPVCEDPRATLTRHFSGYLPEVSIGEIEIALGQPKNG
KAPGEDGITTELLNAGGKPVQRELQKLFNSVLFEGKTPEAWSRGVVILFFKKGDKSLLKN
YRPISLLSHVYKLFSRVITNRLARRLDEFQPPEQAGFRSGYGTIDHIHTVRQIIQKTEEY
NQPLCLAFVDYEKAFDSIETWSVLESLQRCQVDWRYIQVIRCLYEAATMSVQVQNQQTSP
IPLHRGVRQGDVISPKLFTNAMEDMFKTLRWKGRGININGEHISHLRFADDIVIMAETLQ
DLQQMLDDLADSSIRIGLRMNLDKTKVMFNEHVLPEPIAVHGVVLEVVQKYVYLGQVLLR
WVENFEDEVSRRVRLGWVAFGKLRRVLTSSIPQCLKTKVFNQCVLPGMTYGAETWTLTVR
LVHQLKVAQRAMERAMLGVSLRDRIRNEVFRQRTKVIDIAHRISKLKWQWAGHKFGVNEF
LSGDSASANVV