| New model in OGS2.0 | DPOGS200523 |
|---|---|
| Genomic Position | scaffold779:- 14949-19392 |
| See gene structure | |
| CDS Length | 909 |
| Paired RNAseq reads | 1183 |
| Single RNAseq reads | 2719 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009341 (6e-67) |
| Best Drosophila hit | CG8336, isoform C (5e-41) |
| Best Human hit | peptidyl-prolyl cis-trans isomerase D (1e-45) |
| Best NR hit (blastp) | peptidylprolyl isomerase D (cyclophilin D) [Xenopus (Silurana) tropicalis] (9e-65) |
| Best NR hit (blastx) | peptidylprolyl isomerase D (cyclophilin D) [Xenopus laevis] (9e-54) |
| GeneOntology terms | GO:0031072 heat shock protein binding GO:0016853 isomerase activity GO:0006457 protein folding GO:0005737 cytoplasm GO:0042277 peptide binding GO:0003755 peptidyl-prolyl cis-trans isomerase activity |
| InterPro families | IPR019734 Tetratricopeptide repeat IPR002130 Peptidyl-prolyl cis-trans isomerase, cyclophilin-type IPR013026 Tetratricopeptide repeat-containing IPR015891 Cyclophilin-like IPR023114 Elongated TPR repeat-containing domain IPR011990 Tetratricopeptide-like helical |
| Orthology group | MCL14564 |
Nucleotide sequence:
ATGATCCAGGGTGGTGATATCATACATGGTAATGGTACCGGCGGTGAGAGCATCTACGGC
CTGACCTTCGAAGATGAAAACTTCAAGCTTATTCATGAAGCAGGTGTCCTCAGTATGGCG
AATGCTGGGCCAAATACGAACGGATCACAATTTTGCATCACCAGTGTGCCTTGTCCACAA
CTAGATGGCACTAACGTAGTTTTTGGACGGGTGCTGGCTGGCCTGGGGATAGTTCAGGAG
ATACAGAGCCTGTCCAGTGACGATACGCCCTCGGTCGAGTGTGTGATCGATGACTGCGGT
GAGATAGCGGACCTGGATACATGGGATGTTTGCTGTCAGGATGGAACTTTGGACAGATTG
CCGGAACATCCCGAGGATATGAGAACCAACCTCACTATGGACGAGCTCGTTGAAAGTATT
CGCCGGGTGAAGGAGAGTGGTAATGATCTGTTTGGTGCGGGACGGTATAAGGCCGCTGCG
AGGAAGTACCGGAAATGTAACAGATACGTCACACAGGCACAGGAAGTGGCAGCCAAGGAC
GGGGATAAGTACCTGAGCGAGCTGTCCTCGTGCGGTCGTCACTGTTGTCTCAACCTGGCG
GCGTGTCAGTGCCGTCTGAGGGACTACCGCGCCGCTCTGAGCAGCTGCGATCAGGTACTC
GACGTGGACCCCAAGAACGAGAAGGCCCTCTATCGCCGCGGTCAAGCAAACTACGCTCTG
AAGAACTACGAGGCGGCTCTGAGCGATCTCAAGCTAGCGGATAAAGTTTCCCCGCGGAAC
AAAGCCGTCCAGAAGCTACTGGAAGAGGTCCGCGCGTCCAACAAAAACTACAACGACATA
CAAAAGCAGCGGCTGTCAAAATTTTTTCGTGACCAAAAAGAAAAAAACACAACGTTCGGA
CATCACTGA
Protein sequence:
MIQGGDIIHGNGTGGESIYGLTFEDENFKLIHEAGVLSMANAGPNTNGSQFCITSVPCPQ
LDGTNVVFGRVLAGLGIVQEIQSLSSDDTPSVECVIDDCGEIADLDTWDVCCQDGTLDRL
PEHPEDMRTNLTMDELVESIRRVKESGNDLFGAGRYKAAARKYRKCNRYVTQAQEVAAKD
GDKYLSELSSCGRHCCLNLAACQCRLRDYRAALSSCDQVLDVDPKNEKALYRRGQANYAL
KNYEAALSDLKLADKVSPRNKAVQKLLEEVRASNKNYNDIQKQRLSKFFRDQKEKNTTFG
HH