| New model in OGS2.0 | DPOGS200570 |
|---|---|
| Genomic Position | scaffold779:+ 31979-36903 |
| See gene structure | |
| CDS Length | 1092 |
| Paired RNAseq reads | 225 |
| Single RNAseq reads | 586 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009359 (8e-149) |
| Best Drosophila hit | tamas (2e-117) |
| Best Human hit | DNA polymerase subunit gamma-1 (5e-96) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC008519 [Tribolium castaneum] (4e-131) |
| Best NR hit (blastx) | PREDICTED: similar to DNA polymerase subunit gamma 1, mitochondrial [Tribolium castaneum] (4e-125) |
| GeneOntology terms | GO:0006261 DNA-dependent DNA replication GO:0005760 gamma DNA polymerase complex GO:0003887 DNA-directed DNA polymerase activity GO:0008296 3'-5'-exodeoxyribonuclease activity GO:0005739 mitochondrion GO:0006264 mitochondrial DNA replication GO:0007562 eclosion GO:0008340 determination of adult lifespan GO:0003677 DNA binding |
| InterPro families | IPR002297 DNA-directed DNA-polymerase, family A, mitochondria IPR001098 DNA-directed DNA polymerase, family A, palm domain IPR019760 DNA-directed DNA polymerase, family A, conserved site |
| Orthology group | MCL10181 |
Nucleotide sequence:
ATGACCGCTAGTAATGCTCAGAGCGACCGCGTGGGCTCCGAACTACGGTCTATGGTCACC
GCTCCTCCAGGGTACCGCTTCGTTGGTGCTGATGTGGACTCTCAGGAGTTGTGGATAGCC
GCTCTATTGGGTGACAGTTCGTTGATGTGTGGGGGGAGCGCGTTCGGGTGGGCGGTGCTA
GCGGGGGACAAACGGACTAACACCGACCTACACTCACTGACAGCAGTCGCTGCCGGAGTG
AGGAGGGATCACGCTAAAGTCATCAATTACGCCAGGATATATGGTGCCGGGCAGAATTTC
GCTGAGAGATTGCTGAAACAGTTCAACCCGACTATGACGATATCTGAGGCGAAGAGCAAA
GCCGCCAAAATGTTTACTACAACCAAAGGAAAAAGGGTTTACAGGCTGAAGGAAAAATTT
ATGGAGGGTTTCATGGACGAGGAGTCAGGAGATCAGACTGTAGAGATGACTTCGTACCAA
GCGATGCGTCTGGCTAAACTGAGCGGCCGAACTACAGATGAGATGTTCGAGCGACCTCGG
TGGGAGGGGGGAACAGAGTCGCACATGTTCAACAAACTAGAGGAAATAGCAGAGTCATCG
TGTCCTCGTACAAGTTTCCTCGAGGGGCGTCTGTCTCGTTCTTTGGAGGCGGCACATAAC
GGAGGCGGCACTAAACTGAACTGGGTGGTCCAGAGCGCTGCGGCTGACTTCCTACATCTC
ATGCTGGTTAGCATGACACATCTGCAGCCTTCAGCCAGATTTTGTCTCAGTTTCCACGAC
GAGGTCAGATACTTAGTTCCCGAGGAACATAAATACGAGGCAGCCTTGGCATTACAAATA
ACAAACCTTCTCACTAGAGCTTTCTGTTCACAGAGGGTTGGGATACACGATCTACCGATG
TCAGTAGCTTTCTTCTCATCTGTGGAAGTCGATCGAGTTTTAAGAAAGGAAGCCAATATG
GACTGTGTGACCCCTTCAAACCCTCATGGACTGGAAAAAGGCTATGGTATACCTAATGGA
GAGTCATTGACGATATATGATGTCTTAGAGAAAACCGATTGTAACAGATTTTGTACCAAA
GAAACGAAATAA
Protein sequence:
MTASNAQSDRVGSELRSMVTAPPGYRFVGADVDSQELWIAALLGDSSLMCGGSAFGWAVL
AGDKRTNTDLHSLTAVAAGVRRDHAKVINYARIYGAGQNFAERLLKQFNPTMTISEAKSK
AAKMFTTTKGKRVYRLKEKFMEGFMDEESGDQTVEMTSYQAMRLAKLSGRTTDEMFERPR
WEGGTESHMFNKLEEIAESSCPRTSFLEGRLSRSLEAAHNGGGTKLNWVVQSAAADFLHL
MLVSMTHLQPSARFCLSFHDEVRYLVPEEHKYEAALALQITNLLTRAFCSQRVGIHDLPM
SVAFFSSVEVDRVLRKEANMDCVTPSNPHGLEKGYGIPNGESLTIYDVLEKTDCNRFCTK
ETK