| New model in OGS2.0 | DPOGS200571 |
|---|---|
| Genomic Position | scaffold779:+ 37312-37867 |
| See gene structure | |
| CDS Length | 462 |
| Paired RNAseq reads | 130 |
| Single RNAseq reads | 399 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA009360 (7e-55) |
| Best Drosophila hit | CG31957 (2e-32) |
| Best Human hit | probable RNA-binding protein EIF1AD (8e-28) |
| Best NR hit (blastp) | translation initiation factor 1a [Bombyx mori] (2e-53) |
| Best NR hit (blastx) | translation initiation factor 1a [Bombyx mori] (3e-54) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005575 cellular_component GO:0008150 biological_process |
| InterPro families | IPR001253 Translation initiation factor 1A (eIF-1A) IPR016027 Nucleic acid-binding, OB-fold-like IPR006196 RNA-binding domain, S1, IF1 type IPR012340 Nucleic acid-binding, OB-fold |
| Orthology group | MCL15682 |
Nucleotide sequence:
ATGTCGAAAGTAACAAAGAGGAAACATGTGATGAACGAAACATTATGGGATGACTATGAG
TTGCCTAAAGAAAATCAAAGTATAGTTAAAGTTTTGAAAAGTAGAGGAAATAATCTTCAT
GAGATACAAACGCCTACTGGAGAGGAATACTTGGTATCTATGCCGGGAAAATTTCGAAAA
AACATTTGGGTAAAACGAGGCGATTACATTCTAGTGGAACCAATCGAGGAAGGGGATAAA
GTGAAAGCGGAAATAGTTAAAATAATGAATAAGGGCTCTATAAAATATTACAAGGAAAAT
AATGTGTGGCCTAAGGAATTTGATGATAACAAAAAGGAAGAGCTCAAGGAAAATGATGAT
GACTTATTTGTAAACACAAACAGAGCTCATATGAAAAGTTATTCCAGTGATATAGACAGC
AGTGACTCTAGTGACAGTGACAGTCAAAGTGATGATAAATAA
Protein sequence:
MSKVTKRKHVMNETLWDDYELPKENQSIVKVLKSRGNNLHEIQTPTGEEYLVSMPGKFRK
NIWVKRGDYILVEPIEEGDKVKAEIVKIMNKGSIKYYKENNVWPKEFDDNKKEELKENDD
DLFVNTNRAHMKSYSSDIDSSDSSDSDSQSDDK