New model in OGS2.0 | DPOGS200573  |
---|---|
Genomic Position | scaffold779:+ 46009-51448 |
See gene structure | |
CDS Length | 1233 |
Paired RNAseq reads   | 517 |
Single RNAseq reads   | 1527 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA009362 (4e-27) |
Best Drosophila hit   | pod1, isoform F (3e-166) |
Best Human hit | coronin-7 (5e-72) |
Best NR hit (blastp)   | PREDICTED: similar to coronin [Nasonia vitripennis] (9e-176) |
Best NR hit (blastx)   | AGAP000930-PA [Anopheles gambiae str. PEST] (6e-175) |
GeneOntology terms   | GO:0003779 actin binding |
InterPro families    | IPR011046 WD40 repeat-like-containing domain IPR001680 WD40 repeat IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR015505 Coronin IPR015049 Domain of unknown function DUF1900 IPR019781 WD40 repeat, subgroup IPR015048 Domain of unknown function DUF1899 |
Orthology group | MCL12807 |
Nucleotide sequence:
ATGGCCTGGCGTTTTAAAGCCTCTAAGTATAAAAATGCGGCACCTATTGTGCCGAAGCCC
GAGGCCTGCATACGGGACATTTGTGTCGGTTCATATCAGACTTATGGCAATAATATATGT
GCATCTGCTGCTTTCATGGCATTCAATTGGGAGCATGTGGGTTCTAGTTTGGCCGTTCTA
CCTTTAGATGATTGTGGTAGGAAAAGTAAGACGATGCCACTGCTACATGCACATTCTGAC
ACAGTGACGGACATGGACTTCTCTCCCTTTCATGATGGCCTGCTTTTAACTGGCTCCCAG
GATTCCTTGGTAAAAGTATGGCATATCCCACAAGAGGGATTAAAAGAATCCCTTTCAACT
CCCGAATGCACACTGTCACAAAAGCAAAGGCGTGTTGAAAATGTTGGCTTCCATCCAGTT
GCTGACGGACTTATTCATGTTGCTTCCGGACATGAGCTCGCTCTTTGGGATCTCACTAAG
CAGAAGGAAGCTTTTGTTAACAAGGACCATACAGAGGTGATCCAATCAACATCTTGGAAG
AAAGATGGGAAGCTAGTAGGGACTTCGTGCAAGGATAAGAAAGTGCGCATCTTGGATCCT
CGGACACCAAACCCGGTGTTGGGTGTGACTAACAGCCACCAGAACATCAAAGACAGTCGA
CTAGTCTGGCTCGGTGATAGTGACAGGATCTTAACAACAGGTTTCGACTCGGCTCGCCTC
CGTCAAATAATGATAAGGGATGTACGTAATTTATCTCAGACTCAGAAGACATTGGAACTG
GATTGTTCTACAGGAGTGTTGATGCCCTTGTATGACCCTGATACAAATATGCTGTTCTTA
GCTGGGAAGGGAGATACCACTATATTATATATGGAGCTATCTGATAGAGAGCCATATCTT
ATTGAAGGATTGAGGCATTCAGGGGAGCAGACGAGAGGCGCTTGTCTTGTGCCGAAGCGA
GCGTTGCGTGTTATGGAGGGCGAGGTGAACCGCGTGCTGCAGTTGGCGGGCTCCGCCGTG
ATACCCGTCATGTACCAAGTGCCGAGGAAGAGTTACCGGGACTACCATGCTGATTTGTAT
CCTGATACGACGGGTTGTGTGACATACCTGAGTGCTCCGATGTGGCTACAGGGAAGTGAT
TACCCCGTACCAAACATCTCTCTCAGACCCGACCACGACAACTGCAGTCAGGTGCTTTCA
AACTTTTGGTGGGCAGTGTATGTAGAGAGCTAA
Protein sequence:
MAWRFKASKYKNAAPIVPKPEACIRDICVGSYQTYGNNICASAAFMAFNWEHVGSSLAVL
PLDDCGRKSKTMPLLHAHSDTVTDMDFSPFHDGLLLTGSQDSLVKVWHIPQEGLKESLST
PECTLSQKQRRVENVGFHPVADGLIHVASGHELALWDLTKQKEAFVNKDHTEVIQSTSWK
KDGKLVGTSCKDKKVRILDPRTPNPVLGVTNSHQNIKDSRLVWLGDSDRILTTGFDSARL
RQIMIRDVRNLSQTQKTLELDCSTGVLMPLYDPDTNMLFLAGKGDTTILYMELSDREPYL
IEGLRHSGEQTRGACLVPKRALRVMEGEVNRVLQLAGSAVIPVMYQVPRKSYRDYHADLY
PDTTGCVTYLSAPMWLQGSDYPVPNISLRPDHDNCSQVLSNFWWAVYVES