| New model in OGS2.0 | DPOGS211252 |
|---|---|
| Genomic Position | scaffold1541:+ 2600-5323 |
| See gene structure | |
| CDS Length | 2169 |
| Paired RNAseq reads | 275 |
| Single RNAseq reads | 1099 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005373 (0.0) |
| Best Drosophila hit | Lap1 (7e-98) |
| Best Human hit | protein LAP2 isoform 7 (8e-99) |
| Best NR hit (blastp) | PREDICTED: similar to Erbb2 interacting protein isoform 2 [Apis mellifera] (2e-136) |
| Best NR hit (blastx) | PREDICTED: similar to Erbb2 interacting protein isoform 2 [Apis mellifera] (3e-134) |
| GeneOntology terms | GO:0007173 epidermal growth factor receptor signaling pathway GO:0045175 basal protein localization GO:0030054 cell junction GO:0016049 cell growth GO:0005634 nucleus GO:0005176 ErbB-2 class receptor binding GO:0005737 cytoplasm GO:0007155 cell adhesion GO:0030056 hemidesmosome GO:0005604 basement membrane GO:0005178 integrin binding GO:0005515 protein binding GO:0045197 establishment or maintenance of epithelial cell apical/basal polarity GO:0007165 signal transduction GO:0007229 integrin-mediated signaling pathway GO:0009925 basal plasma membrane GO:0005200 structural constituent of cytoskeleton GO:0007049 cell cycle GO:0045104 intermediate filament cytoskeleton organization |
| InterPro families | IPR003591 Leucine-rich repeat, typical subtype IPR001611 Leucine-rich repeat |
| Orthology group | MCL15953 |
Nucleotide sequence:
ATGCCATTCGACTTTTTGTGTTGTGTTAGACCTGGTGTAGAAGATATAGTGGAATTAGAT
TATTCTCACCATTCATTAACGGATGTGCCGACGGAAGTGTTTGTCTACGAGAGGACTCTC
GAAACGCTATTATGTCAAAGCAATCGTATCACCGAATTACCGCGTCAGCTTTTTATGTGT
CATGGCTTAAAGTATTTAGATCTGAGTGACAATGAGCTTCAGGCTATCCCTACAGCCATA
TCGTCGTTGGTTAACTTACAGCATTTGAACCTAAGTAGGAACACCTTAGCATCCATACCG
GATAACATGAAATCATTAAAAAATTTGATGTTTCTAGATCTTAGTGTAAATCCATTAGAA
AAATTACCAGAAACAATCACGAACTTAATAGCAATGCAAGATTTATATTTAAATGATACA
TATCTAGAGTATCTTCCTGGTAACTTTGGCCGTCTCGCAAATTTACGAATACTGGAACTA
AGGGATAATTATCTTATGATCCTTCCTAAGTCATTGTCAAGATCAACTGACCTTTTAAGA
TTAGATATAGGTCAAAATGAATTTCAACAATTTCCTGAGGTAATTGGAAGATTTTCCAAG
TTAAAAGAACTTTGGATTGATAGCAATAGCTTTACAATAATTCCAGCTGTCATCAAACCA
TTGGACAACTTAATACACTTAGAAGCAAGCAATAATATGATTGAAGAGTTAGCACCTGAA
ATTGGTTACTGCTCCCGTCTTGAAGATCTTACTTTATCAGTGAATAGTCTCACACAACTT
CCGGACACTATTGGACAGTTAAGTAATTTAACAGCCCTAAAGTTAGACAATAATAGACTT
TACAGTATACCAGAAAGTATAGGTCAGTTAAAAAATTTAGAGGAGCTTATGTTAATGAGT
AATTATATTGACAAACTACCGTCTTCCATTGGTCTCTTGAGAAAACTACAATATTTAAAT
GTTGATGAAAACATGTTAAGGGTTATTCCTCCAGAAATTGGGAGTTGTGCAAAGTTATCG
GTTCTGTCAGTCCGCTCTAACAAGTTAACAAAAATTCCACCCGAAATTGGACATCTAACT
TCTTTAAGGGTTCTGAATTTGGTAAGAAATTCATTGAGCTATCTTCCCCAATCCTTGTTG
AATTGTGATAACTTAGTAGCCCTTTGGCTGTCTGAAAATCAAAGCAAACCATTAGTGCCT
ATGCATTCTGAAGTAGATCCAAATACTTATGAACAAGTTCTGACCTGTTTCCTCTTCCCT
CAAGTGCCTTTAACTCCCATTGACATTAAATTGGAGAATGTGAAGTCAGAAGCACAAAGT
GTTCCTCGTCATATAAGCTTTGTGGACATGAAACCAGCTGTAAAGACCAATGAAAAGCCT
GGCCAGTTGAGAAGAGCACCTACACCTTATCCAAAAGAATTAAGAGCTATGGCAAAACAT
GCACGAAATATTCATAAAGATGGCACACAGGATGTACCCCCACCTATGCAGAATGCAGTT
CATATCAAAGCTGCCAAAATAACCCCAACTTTGCAACAGAGATTTGCCTCTGATAACAAA
ACTGACATAAATAATATAAATCCTGACAGTTGTAATGTCCAAGATCCAATGAAAGTATCT
GTCTATGATAATTTACCACCTGAAAATACATATGACAAGCCTTTAGACTTAAACTATGAG
GAAGACAAGACATATAAGAGTGTGGATCATGCTTTATATTCTGATAATAACACTGAAACC
ATATCATATAAGGATGAAAATGTGGACACTTGTGGATTAGGTCCATCACATTATGCCATT
AAACAGAATGAAAGATATTCTCCTCGGCAAGAAATCACCAGATCCAGTTCTTCGTTAGTG
TCTAACAATTACAGAAAGCTTTATTCACCTACTGGTCACACAAATGCTACAAATCCATAT
CGCATGACAAACACACCTCTCATATCCGACGATGGTAGCTTTCCACATGTACAACCTATA
TCTAGTCATAATATGTATGAGATATATGATGCTATGCCAGCTTCATCGAATACACCTAGT
GTTGTAAGTCATCGACATAGTCCAAGTGGACTTTCAGAGACTGTATACATGAGAGGTCAA
CCCCCACCTTACCATATTGCTGCTCCTTATACAAAACATGCTCAATACTTTAATGGTACT
GGGGGATAG
Protein sequence:
MPFDFLCCVRPGVEDIVELDYSHHSLTDVPTEVFVYERTLETLLCQSNRITELPRQLFMC
HGLKYLDLSDNELQAIPTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLE
KLPETITNLIAMQDLYLNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRSTDLLR
LDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTIIPAVIKPLDNLIHLEASNNMIEELAPE
IGYCSRLEDLTLSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLMS
NYIDKLPSSIGLLRKLQYLNVDENMLRVIPPEIGSCAKLSVLSVRSNKLTKIPPEIGHLT
SLRVLNLVRNSLSYLPQSLLNCDNLVALWLSENQSKPLVPMHSEVDPNTYEQVLTCFLFP
QVPLTPIDIKLENVKSEAQSVPRHISFVDMKPAVKTNEKPGQLRRAPTPYPKELRAMAKH
ARNIHKDGTQDVPPPMQNAVHIKAAKITPTLQQRFASDNKTDINNINPDSCNVQDPMKVS
VYDNLPPENTYDKPLDLNYEEDKTYKSVDHALYSDNNTETISYKDENVDTCGLGPSHYAI
KQNERYSPRQEITRSSSSLVSNNYRKLYSPTGHTNATNPYRMTNTPLISDDGSFPHVQPI
SSHNMYEIYDAMPASSNTPSVVSHRHSPSGLSETVYMRGQPPPYHIAAPYTKHAQYFNGT
GG