| New model in OGS2.0 | DPOGS211254 |
|---|---|
| Genomic Position | scaffold1541:+ 19279-21918 |
| See gene structure | |
| CDS Length | 1578 |
| Paired RNAseq reads | 357 |
| Single RNAseq reads | 904 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA005374 (6e-180) |
| Best Drosophila hit | CG9601 (4e-92) |
| Best Human hit | bifunctional polynucleotide phosphatase/kinase (2e-92) |
| Best NR hit (blastp) | polynucleotide kinase-3'-phosphatase [Nilaparvata lugens] (1e-121) |
| Best NR hit (blastx) | PREDICTED: similar to polynucleotide kinase- 3-phosphatase [Nasonia vitripennis] (1e-122) |
| GeneOntology terms | GO:0008150 biological_process GO:0005575 cellular_component GO:0003674 molecular_function |
| InterPro families | IPR023214 HAD-like domain IPR008984 SMAD/FHA domain IPR006551 Polynucleotide 3'-phosphatase IPR006549 HAD-superfamily hydrolase, subfamily IIIA IPR015636 Polynucleotide kinase 3, phosphatase IPR013954 Polynucleotide kinase 3 phosphatase, central region |
| Orthology group | MCL14545 |
Nucleotide sequence:
ATGATACGACAATGCTTCCTACGATGTTTACTAGATTCGCATTCTCCTATTAAATTACCA
CATAATGTAGATGTAATAGTTGGACGCAGTAAAATTACTAAAATAAAGGACCAGTCCTGT
TCTCGTCAACAGATTACTTTAAAAGCCGATTGCGAAGAATGCTCTGTCGAATTAAAATCG
ATTGGTATTAATCCATCAGGTTTGGATGGTTTCGCTCTAGAGAGAAATAGCTTGTATAAA
TTACAACATGGGAGCAGAGTTGAGATATTATTAAACAATTATATTCATGTAATTGAGTTT
GAACCACCACCTGATAATCACAATGAACAAAAACAGAATAAAAGGAAACTGGAAGAAGAC
ATTGTGGATTCAGCTCCACGTAAGAAATCAAAAACTGAAGCTGAGTTAATCAAAGTGAGT
ACTAAAGAGGCTGGTAAAGATATGTGGGAAGAAATTGATAAAGGTGAAGTGTATATGTTT
ACCGCTAAGGGAGTAAAATCTAGCAGTAGAATAGCAGCTTTTGACATGGATGGAACATTG
ATAAAGACCAAGTCTGGGAAGGTTCATCCTGTTGATGTCAATGATTGGCAAATTGCCATG
CCGCAAGTCCCACAGAAGCTGTCGGACAAATTTGAAGAAGGTTATAAGATTGTGATTCTT
AGTAACCAATCACCAATTGGAAGTGGCAGAGTTAGAATTGACGATTTTAAGAAAAAAATT
GAGGGTCTAGTGCAGAAATTAAATGTCCCAGTACAAGTCTACTTAGCTACAGGTAAAGGA
ATTTACAGAAAACCTATGACAGGCATGTGGAAAATTTTATCTGAAAAGTATAATGATGAT
ATACTAATTGATATGGATAATAGTTTTTACTGTGGAGATGCGGCAGGCAGAGCAGCTAAT
TGGGCTCCAGGAAGGAAGAAAGATCACTCAATGGCTGATATACTTCTAGCCGAGAACCTT
GGACTAAAATTTTATACACCAGAACAGTTTTTCTTAGGACACTCAATTGCAAATGTTCCG
ATGAGCAAACCGGAATTCATACCAAAAGAAGTAACAGCAGAGCCTTTTAATGAGGATTTA
ATTAGTGATGAAAAGGAGCTTCTTGTTCTGGTAGGCTATCCTGGTAGTGGTAAATCATTC
GTAGCAAAATTGATTGAACAGAAATCAGGAAGCAGATATGTTACAGTGTGTAGAGATGTT
CTTGGTACTTGGCAAAAATGTGCCTCGGAAGCATCTAAGTTACTGCAGCAAGGCAAGAGT
GTGATTGTAGATAGCACAAACCCAGATACAGAATCCCGGTCTCGTTGGACGTCCATAGCC
AAAAATTTAAATGTACAATGCCGTTGTGCAAGGATGATGACCACCAAAGCACATTCATTA
CACAATAATAAGTTTAGAGAGATTATGAAGTTTAAACATGTGCCTGTCAATGAAATAGTA
TTCCATAGTTACAAGAATAAATTTGTTCCACCGTCACTAACGGAGGGATTTAAAGAAATA
ATAGAAGTCAAATTTAACCCTACTTTCAAAGACGACGAAGCCGAAAAAACATATAGAATG
TATTTATTGGAAAAATAA
Protein sequence:
MIRQCFLRCLLDSHSPIKLPHNVDVIVGRSKITKIKDQSCSRQQITLKADCEECSVELKS
IGINPSGLDGFALERNSLYKLQHGSRVEILLNNYIHVIEFEPPPDNHNEQKQNKRKLEED
IVDSAPRKKSKTEAELIKVSTKEAGKDMWEEIDKGEVYMFTAKGVKSSSRIAAFDMDGTL
IKTKSGKVHPVDVNDWQIAMPQVPQKLSDKFEEGYKIVILSNQSPIGSGRVRIDDFKKKI
EGLVQKLNVPVQVYLATGKGIYRKPMTGMWKILSEKYNDDILIDMDNSFYCGDAAGRAAN
WAPGRKKDHSMADILLAENLGLKFYTPEQFFLGHSIANVPMSKPEFIPKEVTAEPFNEDL
ISDEKELLVLVGYPGSGKSFVAKLIEQKSGSRYVTVCRDVLGTWQKCASEASKLLQQGKS
VIVDSTNPDTESRSRWTSIAKNLNVQCRCARMMTTKAHSLHNNKFREIMKFKHVPVNEIV
FHSYKNKFVPPSLTEGFKEIIEVKFNPTFKDDEAEKTYRMYLLEK