New model in OGS2.0 | DPOGS207747  |
---|---|
Genomic Position | scaffold3546:- 136-3874 |
See gene structure | |
CDS Length | 1812 |
Paired RNAseq reads   | 1595 |
Single RNAseq reads   | 4125 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007494 (5e-75) |
Best Drosophila hit   | multi drug resistance 50 (5e-143) |
Best Human hit | multidrug resistance protein 1 (2e-138) |
Best NR hit (blastp)   | PREDICTED: similar to Multi drug resistance 50 CG8523-PA [Tribolium castaneum] (4e-172) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC003797 [Tribolium castaneum] (1e-166) |
GeneOntology terms    | GO:0014045 establishment of endothelial blood-brain barrier GO:0000139 Golgi membrane GO:0005215 transporter activity GO:0006810 transport GO:0015238 drug transmembrane transporter activity GO:0015893 drug transport GO:0016020 membrane GO:0016324 apical plasma membrane GO:0042493 response to drug GO:0005739 mitochondrion GO:0046581 intercellular canaliculus |
InterPro families    | IPR011527 ABC transporter, transmembrane domain, type 1 IPR017871 ABC transporter, conserved site IPR003593 ATPase, AAA+ type, core IPR003439 ABC transporter-like IPR017940 ABC transporter, integral membrane type 1 IPR001140 ABC transporter, transmembrane domain |
Orthology group | MCL10102 |
Nucleotide sequence:
ATGTTCATGTGTATAGCGATTGTGGCATCCGTGTTATGTGGATGTACGACACCGATTAAT
ACTCTGCTCTTTTCTTCACTGCTTCAAAGTATGGTCAACTATGGAAAATCTATTGTGTTA
AATGACCCTCAACCGGATATATTGCTTAGCGAAGTACAAGATTTTGCTATATACAATGCC
GTTCTGGGACTTGTTATTATTATACTGTCATATATCGCAACAGTTCTCATGAACATGTCA
GCCTATAATCAGGCACATCGCATTCGTCAAGAGTATTTGAGAGCTACATTGAATCAAGAT
TTTGAATATTTTGACACTCACAAAACTGGTGATTTCGCAAGCAAAGTCACGGACGATGTT
TTAAAACTAGAGGATGGTATAGGAGAGAAACTAGCGACCTTTATATATTACCAAGTGACA
TTCATAAGCTCTATAATAATGGCGCTGGTGAAGGGCTGGAAACTAACACTCTTATGTTTG
ATCTCATTTCCTATCACTTGTCTGTTAATTGGAGTCACAGGCTTTTTTGGGGCGCGAATA
TCGTATAAAGAAGCTATTTCGGCGGCAAAAGCTGGTTCTATAGCTGAGGAAGTATTGTCG
TCTATAAGAACAGTATTTGCTTTTAGTGGTCAGGAAAAAGAATTAAAAAGATACGAAAAA
TATACTGTGGAAATGAGAGGATTACACGCAAAGAAAAGCATTTTCAATGGCATGTTGATG
GGGTTGATATACCTATGTTTGTTTGGGTCTTACTCTTTATGTTTTTGGTTCGGATATAAG
TTCATGATGGATGAACCAGAATTATATGACGTCAACACCATGATTGCTGTACTTTTTAGT
GTATTAATGGGTTCAACGAACTTTGGTATGTCGGCTACCATCATGGACGTGTTTGGATCA
GCGCGTGGCGCTGGTGAACAAATCTTCAATTTAATAGACAATGTCCCCAAAATTAATCCG
CTCCTGAACCTTGGAATTGCCCCCAAAAGTATTGAAGGAAACATTGAATTCAAAAACGTT
TGCTTCCATTATCCTTCCAGACCTAACGTCAAAATATTAAAGGGAATTAATCTCAGTATC
AAGAAAGGGCAATCAGTTGCGTTAGTTGGACATTCAGGTAGCGGCAAGTCTACTATCGTA
CAACTGATATCAAGAAACTATGATGTAATAAGTGGCAGTGTCCGAATTGATGGTAATGAT
GTCAAAGACCTTTCGGTGAAATGGTTGAGAGCTCAGATCGGTTTAGTCGGTCAGGAGCCG
GTCCTCTTTAATACAACAGTCCGAGAGAACATCAGGTATGGCCGAGAGGACGCTACTAAT
GAGGAAATAGAAAAAGTCGCGAAGCAAGCTAATGCTCATGAGTTTATTATGAAACTTCCG
TTAGGATATGATACATTAGTTGGAGAACGTGGTACATCACTATCGGGAGGTCAAAAACAA
AGAATTGCGATAGCTCGAGCGCTTGTACGAAATCCAGCGATATTATTGCTAGATGAAGCC
ACTAGTGCACTAGATACTGCTTCAGAGGCTAAAGTGCAGAAGGCCTTAGACAGAGCCCAA
GAAGGTCGTACAACTATTGTTGTTGCTCATAGACTCACGACCATAAGAAATGTTGACAAA
ATTTATGTTTTCAAAAGTGGAGATGTGATAGAAAGCGGAACTCATGACGAACTTATTGCC
AAGAAAGGTCACTTTTACGATATGGTAAAACTACAAACATCAAACAATGTAAAGGAGAAA
GGTAATATAACTTTTTTTCCTAGACCATTACAAATATACATATGTATCCGAATAATTTCT
ACTTTTATTTAA
Protein sequence:
MFMCIAIVASVLCGCTTPINTLLFSSLLQSMVNYGKSIVLNDPQPDILLSEVQDFAIYNA
VLGLVIIILSYIATVLMNMSAYNQAHRIRQEYLRATLNQDFEYFDTHKTGDFASKVTDDV
LKLEDGIGEKLATFIYYQVTFISSIIMALVKGWKLTLLCLISFPITCLLIGVTGFFGARI
SYKEAISAAKAGSIAEEVLSSIRTVFAFSGQEKELKRYEKYTVEMRGLHAKKSIFNGMLM
GLIYLCLFGSYSLCFWFGYKFMMDEPELYDVNTMIAVLFSVLMGSTNFGMSATIMDVFGS
ARGAGEQIFNLIDNVPKINPLLNLGIAPKSIEGNIEFKNVCFHYPSRPNVKILKGINLSI
KKGQSVALVGHSGSGKSTIVQLISRNYDVISGSVRIDGNDVKDLSVKWLRAQIGLVGQEP
VLFNTTVRENIRYGREDATNEEIEKVAKQANAHEFIMKLPLGYDTLVGERGTSLSGGQKQ
RIAIARALVRNPAILLLDEATSALDTASEAKVQKALDRAQEGRTTIVVAHRLTTIRNVDK
IYVFKSGDVIESGTHDELIAKKGHFYDMVKLQTSNNVKEKGNITFFPRPLQIYICIRIIS
TFI