| New model in OGS2.0 | DPOGS212426 |
|---|---|
| Genomic Position | scaffold947:- 12849-15559 |
| See gene structure | |
| CDS Length | 1515 |
| Paired RNAseq reads | 679 |
| Single RNAseq reads | 1697 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA002885 (9e-129) |
| Best Drosophila hit | matrix metalloproteinase 1, isoform C (6e-45) |
| Best Human hit | matrix metalloproteinase-25 preproprotein (1e-58) |
| Best NR hit (blastp) | AGAP003929-PA [Anopheles gambiae str. PEST] (1e-81) |
| Best NR hit (blastx) | AGAP003929-PA [Anopheles gambiae str. PEST] (1e-74) |
| GeneOntology terms | GO:0016787 hydrolase activity GO:0016021 integral to membrane GO:0016020 membrane GO:0005886 plasma membrane GO:0008233 peptidase activity GO:0008237 metallopeptidase activity GO:0004222 metalloendopeptidase activity GO:0008270 zinc ion binding GO:0008152 metabolic process GO:0005509 calcium ion binding GO:0016504 peptidase activator activity GO:0046872 metal ion binding GO:0031225 anchored to membrane GO:0031012 extracellular matrix GO:0010952 positive regulation of peptidase activity GO:0006508 proteolysis GO:0009986 cell surface |
| InterPro families | IPR021190 Peptidase M10A, matrix metallopeptidase IPR000585 Hemopexin/matrixin IPR002477 Peptidoglycan binding-like IPR006026 Peptidase, metallopeptidase IPR018487 Hemopexin/matrixin, repeat IPR001818 Peptidase M10, metallopeptidase |
| Orthology group | MCL18955 |
Nucleotide sequence:
ATGGAATTGGATAAATGTGTGTTGGTTGTGCTGTTGCTGCTGGGCTTGCTGAGCCCAGCG
GCAGCTCGGACGATATTTCTTGAAGAAGACATTGTCACGTTTGAAGAGGTAAGCTTTTTA
AAAAAATATGGTTACCTATCTGAACAAGGGTTTGGCTCCCCCACTTACACGGCGCAATCT
ATTGCTGAAGCCGTACGAAGTATGCAGACCTTTGCTGGCCTTCCGCCAACTGGACAGCTC
GATTCAGAAACCAGAAAGCTATTTAAAAGAAAACGTTGTGGTGTGAAAGATATCGAAACG
AAATCAAACAAAATCAAAAGATATATCCTGCAACAAGGATGGGGGAGAAAGGCTATCACA
TACAGGGTTATCAATGGCTCGAGTACATTAGAGAAGTCCCGCGTAGAGGCTTTAATGGCC
AACGCGTTGGCCGTATGGGCGCCACATGGAAACCTACGCTTTAAATCCCTAAGCTCCGCA
GCCGACATACAAGTGTCCTTCGCCAGCAAGGATCATGGAGATGGGTTTCCTTTTGACGGG
CCAGGTCATGTGGTGGCCCACGCGTTCCCACCTCCCCATGGCGCGATGCATTTTGACGAT
GATGAGCAATGGGGTGATAACGCCAACGAGGAAGACGAAGACGTCACCGACTTCTTTGCG
GTGGCCGTCCATGAGGTCGGCCACGCCCTGGGGCTGTCGCATTCGAATGTTAAATCCTCA
GTGATGTATCCATATTACCAAGTTCCCGTCGAAAAGCTACATGAAGATGACATTTTGGGG
ATGCAGGAACTATATCTGAAGGAGCAGCCATCGTCGGCGGAGATCGCAGCCAGTTTCACA
ATAGCTCCACGGTCCACAGTGGCTGACAGCGATGAAAACCTCCTGCCAGACCTGTGCTAC
GCCAACTACGATACTCTACAGGTCATCCAGAACAAGCTGTACGTGTTCGAGGAGGAGTGG
GTATGGGTTTTATCCGAAAGAAAGATCATAGAGGAAGGCTATCCGAAGCGGTTCCACGAT
GTGTTTGTGGGATTGCCGAGGCATTTTAAAGTTATACGCACCATATATGAAAACAGGAAC
GGCCATATTGTTATATTTTCAGGTCGCAGTTACTTTGCATTCAGTTCGCGTTTCCACCTC
ATCAAACGCGGGAGAATCACAGATTTTAAGATACCGTCCCGAGTAGCCGAACTGACCACC
GTGTTTTTGTCAAATTACAACAATAAGACGTACCTCATAGACGACGAGAGATACTGGCGT
TACGACGAAGACACGGAAACCATGGACAAAGGATATCCGAAACAAATGTCAGCGTGGAGG
GATGTCCCGTATCCCGTGGACGCAGCACTGATCTGGAAAGGAGACACGTTCTTCTTCCGA
GGGCCTCGTTTCTGGCGTTTCGATAACAAGTCTGTGAAGGCGCATCCCTACTACCCGCTG
CCCACCGCCGTCGTGTGGTTCCCTTGCGAACCTACACCAGATATAGCTATATATCTCACC
AACTCCGAGCCTTGA
Protein sequence:
MELDKCVLVVLLLLGLLSPAAARTIFLEEDIVTFEEVSFLKKYGYLSEQGFGSPTYTAQS
IAEAVRSMQTFAGLPPTGQLDSETRKLFKRKRCGVKDIETKSNKIKRYILQQGWGRKAIT
YRVINGSSTLEKSRVEALMANALAVWAPHGNLRFKSLSSAADIQVSFASKDHGDGFPFDG
PGHVVAHAFPPPHGAMHFDDDEQWGDNANEEDEDVTDFFAVAVHEVGHALGLSHSNVKSS
VMYPYYQVPVEKLHEDDILGMQELYLKEQPSSAEIAASFTIAPRSTVADSDENLLPDLCY
ANYDTLQVIQNKLYVFEEEWVWVLSERKIIEEGYPKRFHDVFVGLPRHFKVIRTIYENRN
GHIVIFSGRSYFAFSSRFHLIKRGRITDFKIPSRVAELTTVFLSNYNNKTYLIDDERYWR
YDEDTETMDKGYPKQMSAWRDVPYPVDAALIWKGDTFFFRGPRFWRFDNKSVKAHPYYPL
PTAVVWFPCEPTPDIAIYLTNSEP