New model in OGS2.0 | DPOGS204384  |
---|---|
Genomic Position | scaffold265:- 36201-46853 |
See gene structure | |
CDS Length | 1821 |
Paired RNAseq reads   | 2320 |
Single RNAseq reads   | 6640 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | ND |
Best Drosophila hit   | Cip4, isoform A (1e-107) |
Best Human hit | formin-binding protein 1-like isoform 2 (7e-64) |
Best NR hit (blastp)   | PREDICTED: similar to Cip4 CG15015-PA [Apis mellifera] (1e-162) |
Best NR hit (blastx)   | PREDICTED: similar to Cip4 CG15015-PA [Apis mellifera] (1e-125) |
GeneOntology terms    | GO:0017048 Rho GTPase binding GO:0007498 mesoderm development GO:0005515 protein binding GO:0007165 signal transduction GO:0030036 actin cytoskeleton organization GO:0005622 intracellular |
InterPro families    | IPR001060 Fps/Fes/Fer/CIP4 homology IPR001452 Src homology-3 domain |
Orthology group | MCL12395 |
Nucleotide sequence:
ATGTTCGTCAGTCTTAATGAGAAGCGACAGTACGCTATAGATGCTGGCTGGACCTCTGAT
CAATATGATAACTTAGCCACCCATACTCATAAAGGTATCGAATTCTTAGATAAATATGGG
AATTTTGTGAAGGAACGGTGTGCTATAGAGTTAGAATATGCTGGCAAATTAAGGAGGCTT
GTGAAGAGCTATCAACCAAAAAGAAAGGAAGAAGACGAATACGTATATACATCATGTAAA
GCATTCAGACAGCTCCTTCAGGAGTTGGGTGATTTTGCTGGTCAGAGGGAGTTGGTGGCT
GAGAATTTACAGTCGAACGTTGTACGAGAGTTACATTTACTAGCTAAGGAGCTGAGAGAG
GCTAGGAAGGGACACTTAAACGACGGTTCAAAGCAAATGGCCGTCCTTAGTACGGCCGTG
GGAGCGTTGGAGCGTGCGCGTCGTTCATACGAGAGGGCGGCGCGGGAGTCGGAGCGTGCA
CTGGAAGCCTTCCAGCGAGCGGACGCAGACCTGCACCTCAGTCGGGCCGAGGTCGAGAAA
CAGAAGATGAACATGAAATTAAGAAGTCAAGCGTGCGAGGACGCGAAACAGGAATACATG
GACCAACTGAGGAAGACCAATGAGGCACAGAGGCAGCACTACGAACAACAGCTGCCGCAC
GTTTTCAAACAGTTACAGGATTTGGACGAGAAGAGAATAAAACATATAAAGAATTTCATG
ATCAGCTCAGTGGATGTCGAGAGGAAGGTGTTCCCGATTATAATGCAATGTCTCGACGGT
ATGGAACAGGCCGCCAAGAATATAAACGAGAAAGAGGACACTCAGTTAGTAATAGAGAGG
TACAAATCTGGTTTCGTCCCGCCTGAAGACTTCAGATTTGAACCCGCGACTGGCGCTGAC
GCCACGGACTCTGTACCAGCCCCTACCCACAACCATATCACAGTTAGAGGCACGGTGTCC
GGTAACCGGATCAAGAAGAGAGGTGGCCTGCTCTCTATATTCAGCTCAAACAAGAATAAC
TTGTCGGTCGATGGAAAGGAGGATTATTCAGATTTACCGCCCAACCAGAAGAAAAAGAAA
CTGCTAGCTAAAGTACACGAATTGACCAAGCAGGTTGGCCAAGAACAAGCTGCTATGGAG
GGTCTTATGAAAATGAAAGGGGTCTACGAAACAAATCCCACGCTGGGCGACCCTATGACT
GTGGAAGGTCAGCTTAACGAATGTTGTGATAAACTAAAGAAGCTCCGTCTCCAACTACGC
AAATACGAAGAGCTACTGGCGGAAGCGAACAACCAGGTGTGCGCCCAGCCCATACACTCC
ATCAACAAGACTAACGGCGCCCCCACACAGGCCACGAGCATCGGTTCGAACAGCGGTTCC
CTATCCCGCTCAGCGTCCGAATCCTCCGTGAGTACGGGTACCGGCACTAACACTGGCAAC
ACCGTCATGGCGGTGTCGTCCCGGGCCGCGGGGGGTTCCCCGGAGTCGGGTCTCGGCGGC
GAGCTGGCCGCGGGTCACGCGGAACACGCCAACGGTCATGACCACGATGACCACGACCAC
GACCACGACGACCACGAGTCCGACTTCGATTATTATTACGAGCCGGACTTACAGCCACTA
GGTTACTGCAAGGCGCTTTATGCTTTCGAAGCGAACGGCACCGGCTCAACGATGCGTATG
GAGTGCGGCGAGAAGCTGCTGGTGTTGGAGACGGACGCTGGTGACGGCTGGACGAGGGTG
AGGCGGTCGCTCACCAGGGAGGAGGGCTTCGTACCCACCACGTACATCGCCACCACGCTG
TACGCCGACGTGCATCACTAG
Protein sequence:
MFVSLNEKRQYAIDAGWTSDQYDNLATHTHKGIEFLDKYGNFVKERCAIELEYAGKLRRL
VKSYQPKRKEEDEYVYTSCKAFRQLLQELGDFAGQRELVAENLQSNVVRELHLLAKELRE
ARKGHLNDGSKQMAVLSTAVGALERARRSYERAARESERALEAFQRADADLHLSRAEVEK
QKMNMKLRSQACEDAKQEYMDQLRKTNEAQRQHYEQQLPHVFKQLQDLDEKRIKHIKNFM
ISSVDVERKVFPIIMQCLDGMEQAAKNINEKEDTQLVIERYKSGFVPPEDFRFEPATGAD
ATDSVPAPTHNHITVRGTVSGNRIKKRGGLLSIFSSNKNNLSVDGKEDYSDLPPNQKKKK
LLAKVHELTKQVGQEQAAMEGLMKMKGVYETNPTLGDPMTVEGQLNECCDKLKKLRLQLR
KYEELLAEANNQVCAQPIHSINKTNGAPTQATSIGSNSGSLSRSASESSVSTGTGTNTGN
TVMAVSSRAAGGSPESGLGGELAAGHAEHANGHDHDDHDHDHDDHESDFDYYYEPDLQPL
GYCKALYAFEANGTGSTMRMECGEKLLVLETDAGDGWTRVRRSLTREEGFVPTTYIATTL
YADVHH