| New model in OGS2.0 | DPOGS204504 |
|---|---|
| Genomic Position | scaffold265:+ 79215-85312 |
| See gene structure | |
| CDS Length | 2736 |
| Paired RNAseq reads | 2162 |
| Single RNAseq reads | 4920 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007848 (0.0) |
| Best Drosophila hit | CG6385 (0.0) |
| Best Human hit | sarcosine dehydrogenase, mitochondrial precursor (0.0) |
| Best NR hit (blastp) | AGAP007123-PA [Anopheles gambiae str. PEST] (0.0) |
| Best NR hit (blastx) | AGAP007123-PA [Anopheles gambiae str. PEST] (0.0) |
| GeneOntology terms | GO:0008480 sarcosine dehydrogenase activity GO:0004047 aminomethyltransferase activity GO:0005737 cytoplasm GO:0006546 glycine catabolic process |
| InterPro families | IPR006076 FAD dependent oxidoreductase IPR006222 Glycine cleavage T-protein, N-terminal IPR013977 Glycine cleavage T-protein, C-terminal barrel |
| Orthology group | MCL13036 |
Nucleotide sequence:
ATGTTTAAAGTAATTAGAGATAGGTGTATAAGAACGAAAGCGGCGAGTTACTTGAAGAGC
ACAAACGGGAGAAAGTATTACAGCAATGAAGTAGTTACATCAGCCGATATTGTTGTCATA
GGTGGTGGTATCGCGGGCTGTAATACTTTATATCAGTTGTCGAAAAGAGGAGTCAACGCT
GTTCTCTTGGAAAGGAACAAATTGACGAGTGGTACAACATGGCATACGGCTGGTCTGGTA
TGGTCTCTCCGACCCAGTGATTTGGAAATTAAATTGCTACAAGATTCTAGACAAGTTTAT
AGTTCACTAGAGCAAGAGACAGGAGATTATGCAGGATGGATCAATAATGGAGGCATGTTT
ATATCGCGAAGCAAGCTTCGAACGGAAGAATACTTAAGGTTACACACATTAGGGAAAGCA
ATGGGTATTCCGAGCGAAATTCTTGATCCAAATGAAGCTCAGAAGTTATTCCCACTTTTG
GACCCATCAGTATTTAAAATGGCACTCTATTCACCTCTCGACGGCACTATAGATCCCGCA
ATGGCTTGTAACGCCCTCGTCAAAGCAGCCTCCAAGAATGGTGGAAAGATATACGAAGAT
TGTCCGGTAATTGATATTCATTACGCTCATAACTTGCTCGGACATAAAGAAGTCACCGGG
GTTCATACAGAAAAGGGATTTATCAGGACCAAGTGTGTAGTAAATTGTGGTGGTGTATGG
GGTGCTCGTATAGCAAGGTTCGCTGGAGTGCCATCTTTGCCACTGATTCCATTTAAACAC
GCCTACGTAGTATCCGACGCCATCCCAGAAATCAGAGGTTGCCCGAACGTTAGGGACCAT
GATGTCAATTTATATTTCAAAATACAAGGCGAAAGCTGTAATATTGGTGGATATGAAAAT
AATCCAATAATGCTTGATCAGGTTGCAGATAGTCAAAGCTTCCATTTATACGATTTGGAC
TGGGATGTGTTCAGTGTTCATATGAACAGTGCTACGTCACTTTGTCCGAAACTCGGAAAA
GTAGGGATAAAAAGCACAGTTTGTGGTCCCGAGTCATTTACACCCGACCACAAGCCGCTA
ATGGGAGAAGATTGCAATGTTTTTGGTTTGTACCATAACTGTGGATACAATTCCTCCGGC
ATGATGTTTTCTGCTGGGACAGCCATACAATTAGCTGAATGGATCATTAGTGGAAGGCCA
CACTACAACATGTTTACATTCGACATTGCTCGTTTTACGTCCGGCCAACTAGCACGACCG
CACTGGGTCCGTGAGAGCAGTCACGAGGCGTATGTTAAGAACTACAGTATCGTGTTCCTG
AACGACGAACCCCTCGCTGGTAGAGATGCGAGTCATGACGCTCTTCATCAGGAGCTGATA
GATGATGGCGCTGTGATGCAGGCGAGAGCCGGCTGGGAACGTCCAGGGTTCTTTGTACCC
GGGGAAAAGATCAGGGTCCAACAATATGACTGGGGTGGCGTGAATGACTACCCTCGTAAT
TTGGATCAAAGATATGAAGATCTTCTTAGAGGAGATTACACGTTCGGATTTTCAAAACAT
CATGATATCATCGGGTCGGAGGCGTTGGCGTGTAGGAATGCTGCGGCTTTATTCAATATG
TCTTACTACGGAAAGTTTTACTTAACAGGACCTGATGCTCAGAGAACTGCTGAACTAGCT
TTTACCGCTGACTTGAGCAAGAAACATGATGGTGTTGTTTATACTCTTATACTCAATGAG
AAAGGTGGAGTGGAGGCAGATTTGACTGTCAGCGTCCTTGATGGAGGAAGTGGGCAGCTA
CATGAACCGATATTTAAAGGTCGTGGTTACTACGTGGTGACAAGCGGCTTCAGTGCGAAT
CACACAGCGTCTATCATCCGTCACATTATTTACAAACACAAACTTCGCGCCAATCTCACT
GACGTTAGCAAACAGCTTTGCATTCTAGCCATTAATGGTCCTAACAGCCAGCGCATACTG
CAGGGATACACAAGCGCGGGTCTATCAAATGATGCTTTCCCGTTGTACTCACATCGCAGC
ATCAAGGTATCCAAAGGGCCTCACTCTCCTGACAATAAGGCCTACACTTGTCGTGCTTTA
AGAGTGTCTTGGACAGGCGAGCTCGGCTGGGAGCTTCATGTGCCTTCCTCGCACGCAGTT
CAAGTCTACAAAGCTTTAACTCAGAACAGCGGACTGAAAAACGCTGGCTGGAGATCACTT
ACATCTTTAAGTACTGAAAAAGGTTTCCATCTTTGGAATGCTGATCTGAGAACCGATGAT
AATCCGGTAGAAGCAAACCTGTCATTTGCATGTCGCAAGGATGGGGAGTACATTGGCAAC
GAAAGCGTAACAAGGGCTAGGCAAAATGGAGTAACAAAGAAATATGCCTTCTTCACCCTC
GACGATAAGGTCGCATTATTTGGACAAGAAGCTATATACAGAAATGGAGAGCCTGTCGGC
CACCTTCGAAGAGGGGATTATGGCTTCTTCCTTGACAAATCCATTGGTGTAGGCTACGTT
ACCAATAATGGTTCAATGGTCACTAAAAATTACTTACAGGATGGTGAATACGAAATTGAA
GTTATGGGAAAAAGATACAAAGCCAACCTTCACCTAAAGTCTCCATTTGATCCAAAAGGA
CAAAGGATGCTTGGTAATTATGGAGAAATGGGCATGGATGAAAACACACACGAACCTCAT
GCTGGACAAAATGAAAGAGCTGGTGGTAGCGAATAG
Protein sequence:
MFKVIRDRCIRTKAASYLKSTNGRKYYSNEVVTSADIVVIGGGIAGCNTLYQLSKRGVNA
VLLERNKLTSGTTWHTAGLVWSLRPSDLEIKLLQDSRQVYSSLEQETGDYAGWINNGGMF
ISRSKLRTEEYLRLHTLGKAMGIPSEILDPNEAQKLFPLLDPSVFKMALYSPLDGTIDPA
MACNALVKAASKNGGKIYEDCPVIDIHYAHNLLGHKEVTGVHTEKGFIRTKCVVNCGGVW
GARIARFAGVPSLPLIPFKHAYVVSDAIPEIRGCPNVRDHDVNLYFKIQGESCNIGGYEN
NPIMLDQVADSQSFHLYDLDWDVFSVHMNSATSLCPKLGKVGIKSTVCGPESFTPDHKPL
MGEDCNVFGLYHNCGYNSSGMMFSAGTAIQLAEWIISGRPHYNMFTFDIARFTSGQLARP
HWVRESSHEAYVKNYSIVFLNDEPLAGRDASHDALHQELIDDGAVMQARAGWERPGFFVP
GEKIRVQQYDWGGVNDYPRNLDQRYEDLLRGDYTFGFSKHHDIIGSEALACRNAAALFNM
SYYGKFYLTGPDAQRTAELAFTADLSKKHDGVVYTLILNEKGGVEADLTVSVLDGGSGQL
HEPIFKGRGYYVVTSGFSANHTASIIRHIIYKHKLRANLTDVSKQLCILAINGPNSQRIL
QGYTSAGLSNDAFPLYSHRSIKVSKGPHSPDNKAYTCRALRVSWTGELGWELHVPSSHAV
QVYKALTQNSGLKNAGWRSLTSLSTEKGFHLWNADLRTDDNPVEANLSFACRKDGEYIGN
ESVTRARQNGVTKKYAFFTLDDKVALFGQEAIYRNGEPVGHLRRGDYGFFLDKSIGVGYV
TNNGSMVTKNYLQDGEYEIEVMGKRYKANLHLKSPFDPKGQRMLGNYGEMGMDENTHEPH
AGQNERAGGSE