| New model in OGS2.0 | DPOGS214830 |
|---|---|
| Genomic Position | scaffold2531:+ 19918-26309 |
| See gene structure | |
| CDS Length | 987 |
| Paired RNAseq reads | 3 |
| Single RNAseq reads | 77 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013933 (4e-67) |
| Best Drosophila hit | CG14688 (4e-11) |
| Best Human hit | phytanoyl-CoA dioxygenase, peroxisomal isoform a precursor (3e-42) |
| Best NR hit (blastp) | phytanoyl-CoA dioxygenase peroxisomal precursor [Bombyx mori] (8e-74) |
| Best NR hit (blastx) | phytanoyl-CoA dioxygenase peroxisomal precursor [Bombyx mori] (5e-72) |
| GeneOntology terms | GO:0003674 molecular_function GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR008775 Phytanoyl-CoA dioxygenase |
| Orthology group | MCL17247 |
Nucleotide sequence:
ATGCGCCAATGGGCCAAGCGACCAACACAGCAATTTCTCAATGGTCTATCGTCTCCACAA
ATCTATTTTGACGTTCAACAACAACCTGATGCTACTGGAGGTGTTTGTCACTCTGCCACG
GTAGGGGAGTATTGCGAATCCAACTCAGGGACCGGACCAGAGGATCAAATACAGTTGCAG
AGAAATGCCACGCCAGAGCGCGTCAATGCCACACTCCAGACAGGCTCCGATATGAGGATG
CTTCTCACCTTGGAACAGATAACATCAAAGAGATTTCAAGATATCTGCAAAGGAACCGTC
GACAAAGGTAACGCATTAGTATACAAAGAACCAGCGCTCGTGGCTAAGGGTCTGAAGGGA
GAAGACGCTATCAATAAGATATCTGAACTTCAACATGATGAGGTTTTCTCGACTTTCTCT
GAAGACCCTCGTCTGCTCCACATCCTGTCCCAGTTCCTCGGAGGAGACGTCAGCGTCATG
AGCAGTATGGTCATCAACAAGCCCCCAGGAAGTGCGAGACATCCGCCGCATCAGGACCTG
TATTACTTTCCGTTCCGGCCAGCGGAGAAGATCATAGCAGCCTGGACGGCCATCGACGAT
GTGACAGAAGACAATGGATGTCTTTATGTTGTGCCGAGATCACATAAGAACAATATTTTG
TACAGGCATGGAAACTGTCTCGAATCCAACAAACTTTTCCACGGCATCTTGGAGGCCGCC
GCTCCCTGTGAGCCGAGGGTCTGCCTGGAGATGTCTCCCGGAGACACCGTCTTCTTCCAT
CCTCTCATCGTTCACGGCTCCGGGGAAAATAGAACACAGCGATATCGTAAGTGTATAACG
GGACACTTCGCGAGCCCGGCTTGTTACTTCATCGACGTCACGGGAACTGTGCAGGAGGCA
CTCAAGGACGAAATAGAGGAGGAGATACGGAAATACGGATTTACGTTCAGCTTCCAGGTG
AAACGCACGCACGCACACACGCACTAA
Protein sequence:
MRQWAKRPTQQFLNGLSSPQIYFDVQQQPDATGGVCHSATVGEYCESNSGTGPEDQIQLQ
RNATPERVNATLQTGSDMRMLLTLEQITSKRFQDICKGTVDKGNALVYKEPALVAKGLKG
EDAINKISELQHDEVFSTFSEDPRLLHILSQFLGGDVSVMSSMVINKPPGSARHPPHQDL
YYFPFRPAEKIIAAWTAIDDVTEDNGCLYVVPRSHKNNILYRHGNCLESNKLFHGILEAA
APCEPRVCLEMSPGDTVFFHPLIVHGSGENRTQRYRKCITGHFASPACYFIDVTGTVQEA
LKDEIEEEIRKYGFTFSFQVKRTHAHTH