| New model in OGS2.0 | DPOGS215831 |
|---|---|
| Genomic Position | scaffold815:+ 44323-60979 |
| See gene structure | |
| CDS Length | 4077 |
| Paired RNAseq reads | 4565 |
| Single RNAseq reads | 12267 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | taiman (6e-25) |
| Best Human hit | nuclear receptor coactivator 3 isoform d (2e-08) |
| Best NR hit (blastp) | p160 coactivator FISC [Aedes aegypti] (8e-52) |
| Best NR hit (blastx) | p160 coactivator FISC [Aedes aegypti] (1e-47) |
| GeneOntology terms | GO:0003713 transcription coactivator activity GO:0008230 ecdysone receptor holocomplex GO:0005634 nucleus GO:0035258 steroid hormone receptor binding GO:0007298 border follicle cell migration GO:0030374 ligand-dependent nuclear receptor transcription coactivator activity GO:0045449 regulation of transcription GO:0004871 signal transducer activity GO:0007165 signal transduction GO:0048676 axon extension involved in development |
| InterPro families | IPR001092 Helix-loop-helix DNA-binding domain IPR011598 Helix-loop-helix DNA-binding |
| Orthology group | MCL12417 |
Nucleotide sequence:
ATGTTGCCGATGGTTCAAGCCGAGCCTGTGCTGTTCAATAGCGCGGGTCACTCCGCCGAT
GGTGCCTCGCCGACGGCTACCTTACCACCCTCGTTGACACCTGACTCCGAGGTTGAGGGA
CTGGCTGAGTTTTTTTATGATATAGATGTGGCTGTCGTTAACACGTTTTCAAGAATCGAA
TCCTGTGACCTCCAACCGGGAGACACATGGAGGGGGATGCAGGGCAAGATGAGCGTGACC
GCGCCCGGTAAGAAGATAAGAAAAAAGTCGTCAGACATTAAGCCACAATCTCAACAGAAC
AAGTGTCACAACGAGAAGCGTCGCCGTGAACTCGAGAACGAAGTTATAAATCAGCTGGAA
GAACTGTTAGGTACATGTCTGGCGGAGGTGAAGCAGCCTGATAAGAACGGTATAGTGAGA
GAGGCTACGCGGCAGATAGAGGACGTTTTGCAGCGGCGGCGGGACTGCCCCGGAGACTGC
CCCCTCCGCGTCCTCCAATGCCTCTCACCAGTACAGGCTGGAGAAGTCAGCTCCACTCAA
CACCAACCTTCCTCCGGATTCCAGTATTCCGAGCTAAGCACCCTTATTGAGGCAATCAAA
CATTACACCGGCGTCCTGGGTTTAATATTAATGGAAATTAACTCGAAAGGCGAAATCGAA
TGTGTCACGGAAAATATTAAAGATCTTATCCTAGCTGAAAGGACGGAGTTATATAAAAAA
TCAATATTCTCGCTATTGCATGCCGATGACCATGCTAAAATAAAGCCATTGCTGAGAAAT
ATACAGAACTTCGCCTGGGGCTCCACGGAATCTGATAAGTTTCAATACATTCACGCCCGC
CTGCTCATAAAAGACGCCAATGTGACCGATGGTGACAGTTTCGTGGACACCGTGATCCAC
GCTGCGCCGGTGCGCGGCTCGTCCACGGAGGAGGCCGGCTCCGTCATGTGCGTCATTCGG
CGCTGCGAGTCGGCCGCTATCTCCAACGACGCCGTACCCACCATCGTCTTCAGATTGGAC
TCCTGTGATTTGTCCGGTGTCGAAAACTGTATGAACTCTCCTGTATCTCTTTTGGGAACT
CGTTACTTAGATCTCGTTGAGAGTAGTGATCGTGCCCGTGTTTCCGCTCATCTTCAAGAA
GTAGTGGCTCGAGCTGGTTTGCTGGTGGTCAGTGAACCTTACCGGTTACGTATCACGTCC
GAAACACCTCGAATAAGAGTAAGCGCTCAAGCTCGTCTCTTCCCTACCGTCGGTGAACCT
GACTTCATAATGTCAACGAACACTGTGCTCACCGATGATGATATCGGCATACTCGAACCT
GGAGGCTCGCGGCCTGCCCTTGGCGGTCCTCTAATGACGTCGGTCGCCAACGGAGAAACT
TCCTCGTCTGACTCGCGGTACAGGTGTGCCATCAGTCCCGCCGACCCACAGTTCAGTATG
AATGACTTCGACCTCGAATCTTGGCCGCAGTCCTTTTCTATGGGCGACATGAGCGGGGAG
GACTCGAAGGAGCGCAAAGAAAATAACGAAGAATTGAATCCGCACACCTCGCCGGTAGAC
GCTCAGGGTGTGTCACACGAGAAGCCGAATCGGCTGCGATCGCTGCTCATCAAGAAGAGC
GGTCCCTCCACCGACGCCAATTCTAACAACCAGATCCTAAAGGATCTCCTCAAACAAGAG
GATGAAGAAGCGACCAGTAGCGAAACTTCAGCTCCTCACACACCGCACACTCCTCACACG
CCGCAAACTCCGCACACGCCGCATACGCCCTTAACGCCCGCGTCCGCGCGCTCCCCTCTG
CACTCGGCGCAGGCGCACGCTCGTCCGCCGCCGCACCACGCCACACACCAGCCTGTCATG
CACAACAATCAGTTGCTCAAGATACTAAATGACAAATCAGATGAAGATGGAGACGAAAGC
AGAAGAAATTCTACGGACAGTTCTCGTGGCCCGTCCCAGACAAGTGTGCTATCGCAGTTG
CTGTCTAACAGCAACGGCCCCTCGAGCAACGGTCGCTCCCAGGAGGGCAGCGACATGTAC
ATGGATAGAATCGCCGGCATGAAAAGGAAGTTTGAGGAATCCAAAGCATCGTCCAGTAAT
ATTAAAAGAGTCACGCCTGAAAATCAGCAGGTATCGTCAAGCGCGACAAACGCCGGTAAC
GTGACAGTGGTGACGAGCGCGGCGTCCGGGTCTACGAGTCCCGCCACCAGCAGTGCCGGC
ATGAGCGCCCTCTGTCAGAAGAACCAGATCTTGGTGTCCTTACTGGCACGGCAGCAGACG
ACTCCGCCCACGCCGCTACCGCTCCCCAATACTATACTACGGTCGTACCCGCCGCGCGCC
CGCCCCCCGCCACTGCAGCCCCCGCATACTCAGATGCAACGTCCACATCATATGCAACAG
CAGCAGCGACTCATCCATCCCACCATCTCTACTGTCCTCAACACTAGTAACCGAGGCAGC
AGTATGAACGGCGCTGGGCCTGTGTCATCCGCTCCGAGCGCGGAATGTCCTTCCAGTATG
AGTCTCCAGACGTCGCAGTCGATGCCTGTCCAGAGTCACCTGCAGATGGTGCTACAGGGT
GTGTCGCGGAACTCGTACCAGGCTGGTGTGGCCGCGCAGCCCCACTATGCTGCACCCTCC
GCACATCACCCCTATAATAACCAAGGGTCGCGGTCCCAAAGTGGTTCCGGAGACAGCGAG
GTCCCCAGCGACCAAGCGCTGTCTGATATTCTAGACGAGGTGATCGAGAACATGCCGTAC
AATGACAGGCCCGCGCCAGACGTCGCTATCATGGACATGGATAGTAATCGACAAATTCGT
TCAGACTATCAGGGTGTTAAAGAGAAAAACGCCGTCATAAACGCTATAACACAAAGTCTC
ATGCAGTGCGAGACAGCGACTAAGAGTCCTGTGTCGTCGAGTCCCGTCCCGCCGGTGTAC
CCGGTACAGAGTCCGGGCTCCGTGAGCGGACAGTGTACTATGTCGGGAGGCGTGGGCGTC
GGCAACGTGTATGGGCTGGTGTCGCGGGACGCGGACGGAGCCCGGGCCCGCGCCCTCGTG
GAACAACAGCGGGCAAGACTGCTGCAAATGCAGCGCTCGCAGTCGCTACTTGTGTCGCCT
GAGGCCGCCGAGCAGCCGCAGCCCGACCTGGGCTCCACAATTAACGCCTTGGTGTCCGCG
ACGCCGCCTAACGTAGCCTTAACGCGGAACGACTACCATCACTTATATCACCAGCCCAAT
CAAATGGGGACGAATTACGGTACAAATAAATTAACTTCATCTCAACAAAATCCTATGCTG
AGTAGACAGCTCGGAGTTGGCGGAAATTCTTACGCAGCGGCGTTACACACGCCGCAAGCG
CCGCAACCTTACCATAGAGCGCCGCGTCCGCATCCTGTGGGCGGCTACTATGAGGAGAGC
GAGGCGGGGGCCTACTGCGGGGAGTACGGGCGGCGCGTGGCGCACGGCGCGCACCCTGCG
CACGCGCACCCTCACCCGCACGCGCACCCACACGGCCATCACCCCCCGCACACGCCGCAC
CCTCCGCACACGCCGCACCCGCCGCACGCCGACCACCAGATGTCATTCGTTTGGAACTGG
TGTGGCGGCAACGTTGACCATTCTGTGTTAACCGAAGTCTATTGTAATGATGATGACCCC
GGGGTGCGTGCAGGCGGCGGTGTGGGAGGTGTGGGCGGCGTGAGCAGTGTGGGGGCCGTG
GGCGTGGGAGGCGCGGCGGGCGGAGGTACGTCGGAGTACGTGCGTAACGAGCTGCGTGCT
GTGGTGGGCGCGCGGTCAGCCCGGCCCGAGCTTCACACGCTGCACGCTCCTGACCTCGAC
CCGCTCCTTAACTTCGACATGCCCGCGCCAGGTGGCGGCGGTGTGGTGGGGGGCAGAGCG
GCGGCGACACCGAACGCCTGGGAATCGCAACAGAGCACAGCGAATACTACGGAGGAGGTC
TCGGCGGGGGCGGCGGCGGGGGGGCAGCAGCGGGCGGCGGGCGGTGATGAGGAGCCGGCT
GCGGCTGGCAATACGCCCGCTAAGGCATCACTGCTACAGAAACTACTGTCGCAGTGA
Protein sequence:
MLPMVQAEPVLFNSAGHSADGASPTATLPPSLTPDSEVEGLAEFFYDIDVAVVNTFSRIE
SCDLQPGDTWRGMQGKMSVTAPGKKIRKKSSDIKPQSQQNKCHNEKRRRELENEVINQLE
ELLGTCLAEVKQPDKNGIVREATRQIEDVLQRRRDCPGDCPLRVLQCLSPVQAGEVSSTQ
HQPSSGFQYSELSTLIEAIKHYTGVLGLILMEINSKGEIECVTENIKDLILAERTELYKK
SIFSLLHADDHAKIKPLLRNIQNFAWGSTESDKFQYIHARLLIKDANVTDGDSFVDTVIH
AAPVRGSSTEEAGSVMCVIRRCESAAISNDAVPTIVFRLDSCDLSGVENCMNSPVSLLGT
RYLDLVESSDRARVSAHLQEVVARAGLLVVSEPYRLRITSETPRIRVSAQARLFPTVGEP
DFIMSTNTVLTDDDIGILEPGGSRPALGGPLMTSVANGETSSSDSRYRCAISPADPQFSM
NDFDLESWPQSFSMGDMSGEDSKERKENNEELNPHTSPVDAQGVSHEKPNRLRSLLIKKS
GPSTDANSNNQILKDLLKQEDEEATSSETSAPHTPHTPHTPQTPHTPHTPLTPASARSPL
HSAQAHARPPPHHATHQPVMHNNQLLKILNDKSDEDGDESRRNSTDSSRGPSQTSVLSQL
LSNSNGPSSNGRSQEGSDMYMDRIAGMKRKFEESKASSSNIKRVTPENQQVSSSATNAGN
VTVVTSAASGSTSPATSSAGMSALCQKNQILVSLLARQQTTPPTPLPLPNTILRSYPPRA
RPPPLQPPHTQMQRPHHMQQQQRLIHPTISTVLNTSNRGSSMNGAGPVSSAPSAECPSSM
SLQTSQSMPVQSHLQMVLQGVSRNSYQAGVAAQPHYAAPSAHHPYNNQGSRSQSGSGDSE
VPSDQALSDILDEVIENMPYNDRPAPDVAIMDMDSNRQIRSDYQGVKEKNAVINAITQSL
MQCETATKSPVSSSPVPPVYPVQSPGSVSGQCTMSGGVGVGNVYGLVSRDADGARARALV
EQQRARLLQMQRSQSLLVSPEAAEQPQPDLGSTINALVSATPPNVALTRNDYHHLYHQPN
QMGTNYGTNKLTSSQQNPMLSRQLGVGGNSYAAALHTPQAPQPYHRAPRPHPVGGYYEES
EAGAYCGEYGRRVAHGAHPAHAHPHPHAHPHGHHPPHTPHPPHTPHPPHADHQMSFVWNW
CGGNVDHSVLTEVYCNDDDPGVRAGGGVGGVGGVSSVGAVGVGGAAGGGTSEYVRNELRA
VVGARSARPELHTLHAPDLDPLLNFDMPAPGGGGVVGGRAAATPNAWESQQSTANTTEEV
SAGAAAGGQQRAAGGDEEPAAAGNTPAKASLLQKLLSQ