New model in OGS2.0 | DPOGS203179  |
---|---|
Genomic Position | scaffold1906:- 14964-28139 |
See gene structure | |
CDS Length | 3339 |
Paired RNAseq reads   | 471 |
Single RNAseq reads   | 1148 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA011170 (0.0) |
Best Drosophila hit   | CG6938 (0.0) |
Best Human hit | anoctamin-4 (2e-161) |
Best NR hit (blastp)   | hypothetical protein AaeL_AAEL007716 [Aedes aegypti] (0.0) |
Best NR hit (blastx)   | hypothetical protein AaeL_AAEL007716 [Aedes aegypti] (0.0) |
GeneOntology terms    | GO:0006811 ion transport GO:0005216 ion channel activity GO:0005254 chloride channel activity GO:0034707 chloride channel complex GO:0016021 integral to membrane GO:0016020 membrane |
InterPro families   | IPR007632 Anoctamin/TMEM 16 |
Orthology group | MCL10108 |
Nucleotide sequence:
ATGGACAAAATTACGTTTGAGAGTGAAAGAGTGAAGGGGAGTCAGAGCGAGTCATCGTCT
AGACGAAACAGTGATGATGGCGGAAGAGCAAAAAGAGAAAGACTACGTGAAGATGGCACC
AGTTCTGAACCACCCACAGCCAGTGTGACCCACAAGGCCTGGGACGACCTCACCAGCTCG
ACTTCCACCACCAGGACCGAGCTGAGTGTCTCTGATGGCGCTGAAGATCAGGTGAGAAGT
CGTCGAAGGAGTCAGGAATCAGCTCTTCCTAATACTCCACTGCAGCGTCCTGCGTGGAGG
TCAGCAGATAGCTTGGCACCAGATTCGGCCTTCGGCACATCCTTAGCGGACATTATGGAG
AGCCCAAACAACAAGAGCCCGTTTGCGGAATCAACAGGAAATCAGATATATCTTCGTGAC
GATATCATATCCCGGGACAGTTCGGAGGAGAGGCGAGCCAAGCTCAACTGGAAGTTGGTG
AGGAATGTCACTTCAGCCGCTGGAGCCTTCAATAAGAACGCTCTGCCTGGCTCAGCGCTG
CCCACCTTCCAGTCGAAACCTGGCAGCAATAATTCTAATTACAACAAACAGAGAAGAAAA
GAGTCGATGCCAAACACGAAGAATGAGAAAGTGGAAGATATTGGCGAAACCAGCCCTGAG
GGTCTAGATCCTGATTCCCTGATGTTCCGGGACGGGAGGCGCCGTATTGACATGGTGCTG
GCCTACGAGGAAGAAGACTACGGAGTCATGACGGAGGCCGAGGCGAAGAGGAGAGACAGC
AGGAGGACGTTCCAGGAGAATCTGGTGAAGGAAGGGCTGGAATTGGAGCTCGAGAACAAA
TGCCTGTCCTTCGACGGCAAGACCTGGTTCCTGAAGATACACATCCCCTGGAAGACGGAA
ATGAGACTGGCGGAAGTCATCGGCATGAAGTTCCCCACCAAACGATTTATAACCATATCC
GTTAGAGCGTGGGGAAACGATGTCCAAGCGCAGAGAGAGAAGCGCTGGCATACAAAATGG
CGGAGAAAATGGAAGGAGCTGTATGAATATGAGCCGACCAGAATAGAGCCTGAACCCTCC
TTCTACAGCGCCACGGACAAACCAGGGGTCAGGAGAGAAGAACAATTCTTAGTAAAAGAC
AGACACACCATGTTTTCGCCGGCCCAGCGCAGTCTCATGGTGATGCAGATTCTGTTGAGA
GCCAAATACGATAATAATGATACTAAGATGGGTATCCGTCGCCTGCTGAACGACGGCACG
TACCTGGCGTGTTTCCCGCTGCACGAGGGCCGCTACGACCAGGACAACGAGGACAAGACA
CAGACGGACAGACGGCTTCTGTATCTAGAATGGGCTCGTCCCTGCAAATGGTACAAAAAG
CAGCCCCTTTGGCTGGTCAGAAGATACTTCGGGGAGAAGATAGCGTTGTACTTCTGTTGG
CTGGGATTTTACACTAAAATGTTGTACGCGCCCGCCATAGTCGGCACTCTCTGCTTCCTG
TACGGACTGGCTAGCATGAACTCGCAGGACAACATACCCAGTAAAGAGATCTGCGACGCG
TCCGGTCCTGGCAACACCACGCTGTGTCCCCTCTGCGACAAGGCCTGCCAGTACCAGCTC
CTCTCGGACTCGTGCCTGTTCGCCAAGCTGACCTACCTCTTCGACAACCCGGCGACCGTG
TTCTTCGCTATCTTCATGTCTTTCTGGGCAACAACATTCCTTGAACTGTGGAAACGAAAG
CAATCAGTGTTAAGATGGGAGTGGGATCTGGGAGGAGTGGACCAAGACGAGGACCCTCGA
CCTGAATTCGAGACGTCGGTGAAAACGTTTCGCACCAACCCGGTGACGAGGGAGAAGGAA
CCTTACTTACCCACCTGGCAGAAGACCATGAGATACGTCGCCACCAGCTCGGCTGTACTC
TTCATGATAACCATAGTGATGGGTGCTGTCCTGGGCACCATTATATATAGGATATCTATG
GTCTCTGTCATCTACGGAGGCAGCGGATTCTTCTTAAAGAAACACGCCAAGATCTTCACC
GCCATGACGGCCGCCCTGATCAATTTGACAATGATCATGATTCTAACGCGCGCAATGGCG
CCATCTAGTACTATTGGCAATATATACGCCAAAGTCGCCGTTTACTTGACGAACGTCGAA
AACCCGAGGACGCAGACCGAGTACGAGGACTCCTACACCTTCAAGATATTCTTCTTCGAG
TTCATCAACTTCTATTCCTCGCTCATATACATAGCCTTCTTCAAGGGTCGTTTCTTCGAC
TACCCCGGCGACGACCAGGCCAGGAAGTCGGAGTTCTTCAAGCTGAAGGGCGACATCTGC
GACCCGGCCGGCTGCCTGTCCGAGCTGTGCATACAGCTGGCCATCATCATGATCGGCAAG
CAGTGCTTCAATAACTTCGTGGAGCTTGGATACCCTAAGTTGCACAACTGGTGGCGTCTC
CGATCTCATCGTGCTGTGACCCGGGACCCGAGCCGCGCGCACATGGCCTGGGAACAAGAC
TATCACCTACAGGACCCGGGACGCCTCGCGCTCTTCGATGAATATCTCGAGATGATCCTC
CAGTACGGGTTCGTGACGCTGTTCGTGGCGGCCTTCCCCCTGGCGCCGCTGTTCGCGTTA
CTCAACAACGTGGCCGAGATACGTTTGGACGCTTACAAGATGGTGACGCAGGCGAGGAGG
CCGCTCGCCGAGAGGGTCGAGGACATAGGGGCTTGGTACGGCATCTTGCGAGGCATCACG
TACGCCGCGGTGGTGTCCAACGCGTTCGTGATAGCCTACACGAGCGACTTCATACCCCGC
ATGGTCTACAAGTACGTCTATTCTCCCGACAAAACGTTGGCCGGCTACATAGACCACTCT
CTGTCCTTGTTCAACACGTCTGACTATCGAGCCGACTGGGGCGCCGATAGCGAAACCGAC
CCGCCGCTCTGTTCCTACCGAGGTTACCGCAACCCCCCAGAACACAGCGACCCCTACGGC
CTGTCGCCGCACTACTGGCACGTGTTCGCAGCTAGGCTGGCCTTCGTAGTGGTGTTCGAG
CACGTGGTGTTCGGTCTGACGGGTCTGATGCAGCTGTTCATCCCGGACGTGCCCACCGAG
CTGCGCATACAGATACAGAGAGAGGCTCTGCTGGCCAAGGAGGCCAAGTACGAGCACGGG
CGGAGGAGGCTCTCCACCGAGTACAGGCAGCTCATCACACACACCGACGACGAGCGGGCC
TCAGGGCCGTATCAGCGGCGGACCTCGCGGGTGTCGGACGGCCTCGACGCTCACGTGGCC
GTCACACAGAGACCTTCATCTCCCAGGATCACTCACTGA
Protein sequence:
MDKITFESERVKGSQSESSSRRNSDDGGRAKRERLREDGTSSEPPTASVTHKAWDDLTSS
TSTTRTELSVSDGAEDQVRSRRRSQESALPNTPLQRPAWRSADSLAPDSAFGTSLADIME
SPNNKSPFAESTGNQIYLRDDIISRDSSEERRAKLNWKLVRNVTSAAGAFNKNALPGSAL
PTFQSKPGSNNSNYNKQRRKESMPNTKNEKVEDIGETSPEGLDPDSLMFRDGRRRIDMVL
AYEEEDYGVMTEAEAKRRDSRRTFQENLVKEGLELELENKCLSFDGKTWFLKIHIPWKTE
MRLAEVIGMKFPTKRFITISVRAWGNDVQAQREKRWHTKWRRKWKELYEYEPTRIEPEPS
FYSATDKPGVRREEQFLVKDRHTMFSPAQRSLMVMQILLRAKYDNNDTKMGIRRLLNDGT
YLACFPLHEGRYDQDNEDKTQTDRRLLYLEWARPCKWYKKQPLWLVRRYFGEKIALYFCW
LGFYTKMLYAPAIVGTLCFLYGLASMNSQDNIPSKEICDASGPGNTTLCPLCDKACQYQL
LSDSCLFAKLTYLFDNPATVFFAIFMSFWATTFLELWKRKQSVLRWEWDLGGVDQDEDPR
PEFETSVKTFRTNPVTREKEPYLPTWQKTMRYVATSSAVLFMITIVMGAVLGTIIYRISM
VSVIYGGSGFFLKKHAKIFTAMTAALINLTMIMILTRAMAPSSTIGNIYAKVAVYLTNVE
NPRTQTEYEDSYTFKIFFFEFINFYSSLIYIAFFKGRFFDYPGDDQARKSEFFKLKGDIC
DPAGCLSELCIQLAIIMIGKQCFNNFVELGYPKLHNWWRLRSHRAVTRDPSRAHMAWEQD
YHLQDPGRLALFDEYLEMILQYGFVTLFVAAFPLAPLFALLNNVAEIRLDAYKMVTQARR
PLAERVEDIGAWYGILRGITYAAVVSNAFVIAYTSDFIPRMVYKYVYSPDKTLAGYIDHS
LSLFNTSDYRADWGADSETDPPLCSYRGYRNPPEHSDPYGLSPHYWHVFAARLAFVVVFE
HVVFGLTGLMQLFIPDVPTELRIQIQREALLAKEAKYEHGRRRLSTEYRQLITHTDDERA
SGPYQRRTSRVSDGLDAHVAVTQRPSSPRITH