| New model in OGS2.0 | DPOGS211910 |
|---|---|
| Genomic Position | scaffold5490:+ 2167-2734 |
| See gene structure | |
| CDS Length | 480 |
| Paired RNAseq reads | 10077 |
| Single RNAseq reads | 30069 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001106 (7e-82) |
| Best Drosophila hit | ribosomal protein L21 (8e-65) |
| Best Human hit | 60S ribosomal protein L21 (1e-56) |
| Best NR hit (blastp) | ribosomal protein L21 [Bombyx mori] (2e-83) |
| Best NR hit (blastx) | ribosomal protein L21 [Bombyx mori] (1e-83) |
| GeneOntology terms | GO:0006412 translation GO:0022625 cytosolic large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0005811 lipid particle GO:0000022 mitotic spindle elongation GO:0007052 mitotic spindle organization |
| InterPro families | IPR018259 Ribosomal protein L21e, conserved site IPR001147 Ribosomal protein L21e IPR008991 Translation protein SH3-like |
| Orthology group | MCL12496 |
Nucleotide sequence:
ATGACGAACTCCAAAGGTTACCGCCGTGGAACCAGGGACTTGTTCGCCCGCAGGTTCCGT
ACCCATGGCACCATCCCTCTATCTACTTATATGAAAGTATACAAAGTCGGTGACATCGTC
GACATTAGGGGCAATGGTGCAGTCCAAAAGGGTATGCCACACAAAGTTTACCACGGAAAG
ACCGGTCGAGTGTACAACGTCACAGCTCACGCTCTTGGAGTCATCGTGAACAAGAAGGTT
GGTGGAAGGATCATCCCCAAGAGGATCAACATCCGCATTGAACACGTCAAGCACTCCAAG
TGCCGAGAGGACTTCCTCAAGCGTGTGAAGGAAAACGAGAGGTTGCTAAAGGAAGCCAAG
GCTGCCGGAAAGGTCATAAACCTCAAGAGACAACCACAGCCCCCAAGGGCTGCCCACATT
GTCAGCGGTACAGAGAAACCAGTCCTGCTCGCTCCTATTCCATACGAGTTTGTAGCCTAA
Protein sequence:
MTNSKGYRRGTRDLFARRFRTHGTIPLSTYMKVYKVGDIVDIRGNGAVQKGMPHKVYHGK
TGRVYNVTAHALGVIVNKKVGGRIIPKRINIRIEHVKHSKCREDFLKRVKENERLLKEAK
AAGKVINLKRQPQPPRAAHIVSGTEKPVLLAPIPYEFVA