| New model in OGS2.0 | DPOGS200506 |
|---|---|
| Genomic Position | scaffold3328:- 1043-5549 |
| See gene structure | |
| CDS Length | 1281 |
| Paired RNAseq reads | 149 |
| Single RNAseq reads | 708 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001717 (2e-59) |
| Best Drosophila hit | Zpr1 (2e-42) |
| Best Human hit | zinc finger protein ZPR1 (6e-43) |
| Best NR hit (blastp) | PREDICTED: similar to zinc finger protein [Tribolium castaneum] (4e-53) |
| Best NR hit (blastx) | PREDICTED: similar to zinc finger protein [Tribolium castaneum] (5e-52) |
| GeneOntology terms | GO:0005515 protein binding GO:0008270 zinc ion binding GO:0008150 biological_process GO:0005575 cellular_component |
| InterPro families | IPR004457 Zinc finger, ZPR1-type IPR012677 Nucleotide-binding, alpha-beta plait |
| Orthology group | ND |
Nucleotide sequence:
ATGTCACCAGAGGTCACAACAGTGGAGGGTATCATATCGAGGGCCATCACAGGCCTAACA
CAGGACCAGGCCGTTAGAAGACAACAGCATCCAGAACATGCGGAGCAAATAGATCAGTTC
GTCGCCAAGCTGGAGGAACTTAGAAGTCTGCAAAAGACCTGGACCCTCATCATAGAAGAT
ATAACCGGGAACTGTTTCGTAGAGAACCCAGAGGCTCCTAAAAAGGATCCGGGCTGTGTC
AGGACGGACTTCAAGAGGAGTAAAGAGGATGATATCAAACTGGGAATATACACGGAGGGC
TCGCAAGCCCTCGCCGGAGCCCTAACGTCGGAGGAGCCCTCGGTGGCTAGCTACGACCAG
CTCGCATCGGACGAAGTGCTGCAGTTCAGGACCAACTGCCCTGAATGTAACGCACCAGCC
GACACCAACATGAAGATCACTAAGATTCCGCACTTCAAGGAAGTTGTGATAATGGCGACT
GTCTGTGACGCGTGCGGGCATCGGACCAATGAGGTTTATTCAATAACAAAAGAATCCAAT
CATCTCCTGATCTTCGGAGTGCCGTCACTGAACCTTCGTCAAGAAACAAAATCATTGTTC
ATCAAGTTCGGTAAACTGTTAAAGTTCAACATTACTGAACACAACGCTGAACCCTTCACG
GAGACTTACCATGCTCAATATGAAAAAATACAATCTGCTAGAGTCGCCAAAAGAATGTTA
GACACAAAGAACTTCTACGGAGGCGTCTTGCATGTATGCTATGCTCCGGAATTAGAAAAT
GTTGATGAAACAAAACAGAAACTCATTCAACGACAAAGAGATGTGATTTTTAGACTCAGA
AATCTCCAAAGGGATACTGAAAAACAGTCCGTGGAACAACCGACTACCAATATACACACT
ATGGCTAGTCAAGAAAAAGAATTGCCAAAAAAACTAGATATGGGAAAAATAAACGTAATT
AAGTTAAATGACACCATCGGAACACACAGGAGATGGAAAAGGAGGAAAATAAATCATGCA
CAGGAAATAAAAACTAGTTCGGAACAGAATACTAAAGAGTCGGATGCCAATGATAGTACT
AAGGACTATAGCTGTGAGAACGGGATAAGTTTACAAGCACCCAGTGATATTGAAATAGTA
GATTGTACCTCAGCAGACTCAGCCATCATCACAAATATCAACGAACACTTAAATTATAAC
AAATTCGGTAATGAAGTTATAAGAAAAGTGCCAATGAAGCCCGAGAACAAAATACAATTT
TACATAAATAAAAAGTCGTAG
Protein sequence:
MSPEVTTVEGIISRAITGLTQDQAVRRQQHPEHAEQIDQFVAKLEELRSLQKTWTLIIED
ITGNCFVENPEAPKKDPGCVRTDFKRSKEDDIKLGIYTEGSQALAGALTSEEPSVASYDQ
LASDEVLQFRTNCPECNAPADTNMKITKIPHFKEVVIMATVCDACGHRTNEVYSITKESN
HLLIFGVPSLNLRQETKSLFIKFGKLLKFNITEHNAEPFTETYHAQYEKIQSARVAKRML
DTKNFYGGVLHVCYAPELENVDETKQKLIQRQRDVIFRLRNLQRDTEKQSVEQPTTNIHT
MASQEKELPKKLDMGKINVIKLNDTIGTHRRWKRRKINHAQEIKTSSEQNTKESDANDST
KDYSCENGISLQAPSDIEIVDCTSADSAIITNINEHLNYNKFGNEVIRKVPMKPENKIQF
YINKKS