| New model in OGS2.0 | DPOGS214274 |
|---|---|
| Genomic Position | scaffold161:+ 104590-115866 |
| See gene structure | |
| CDS Length | 678 |
| Paired RNAseq reads | 71 |
| Single RNAseq reads | 341 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001157 (2e-12) |
| Best Drosophila hit | CG5708, isoform B (5e-17) |
| Best Human hit | LIM domain transcription factor LMO4 (1e-15) |
| Best NR hit (blastp) | PREDICTED: similar to GA19074-PA [Tribolium castaneum] (4e-27) |
| Best NR hit (blastx) | PREDICTED: similar to GA19074-PA [Tribolium castaneum] (3e-31) |
| GeneOntology terms | GO:0008270 zinc ion binding |
| InterPro families | IPR001781 Zinc finger, LIM-type |
| Orthology group | MCL11038 |
Nucleotide sequence:
ATGAATAGCGTCATCAGGTGTCCAAGAGCGGTGTTGTGCTGGTGGGTGCGAGCGGTCCCC
GCTCCAACCGTCAAGCTGGCAGCGAGCGCGTTGAGCATGAACCCGCACTACCACGGGTAC
GCGGAGCTCAGCTCACCTCACCCGCCCTCTCCGGAGGCCGCTTTCGCCAACGGACACGAC
TACCCTCACAATAACAACAATCCCGCGCTCAAAGAATGCGCCGGTTGCGGAGGGAAGATT
GTAGAAAGGTTCCTTCTCCACGCCCTAGACAGATACTGGCACCACGGGTGTCTGAAGTGC
ACATGTTGTGGACAAGCCCTCGCGGACATGGGACGATCCTTTTATTTCAAAGGCGGGATG
ATATTATGCAAAAGCGACTACACAAGCATCCCTTGCCCCACCTGCCCCACTCGAATTAGT
AAACAAACGTCTTTACGAGCGGTTTTACGAGCCCCAAGATATTTAGGTCTCGCGCACGCT
TCTTTACGACATAATGAATTTGTTGATGAACTACGTATTAGAAAGTTCGAAATAGATCCG
TCTGGTGACCGGCCATCGCCTCAGTGGGTGGGTTGCGGGTTGGGACAGAGAGGTGACGGG
GCTCTTGGTGGTGCGTGGCGCGGGGCAGAACAGTCCCCCCAAAGGGGACGGGGGCAATTA
GCGGTGATAGTCGATTAG
Protein sequence:
MNSVIRCPRAVLCWWVRAVPAPTVKLAASALSMNPHYHGYAELSSPHPPSPEAAFANGHD
YPHNNNNPALKECAGCGGKIVERFLLHALDRYWHHGCLKCTCCGQALADMGRSFYFKGGM
ILCKSDYTSIPCPTCPTRISKQTSLRAVLRAPRYLGLAHASLRHNEFVDELRIRKFEIDP
SGDRPSPQWVGCGLGQRGDGALGGAWRGAEQSPQRGRGQLAVIVD