| New model in OGS2.0 | DPOGS206564 |
|---|---|
| Genomic Position | scaffold210:- 8552-19488 |
| See gene structure | |
| CDS Length | 3009 |
| Paired RNAseq reads | 1437 |
| Single RNAseq reads | 3183 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013799 (1e-164) |
| Best Drosophila hit | Smc5, isoform E (1e-93) |
| Best Human hit | structural maintenance of chromosomes protein 5 (4e-110) |
| Best NR hit (blastp) | PREDICTED: similar to structural maintenance of chromosomes 5 smc5 [Tribolium castaneum] (3e-147) |
| Best NR hit (blastx) | PREDICTED: similar to structural maintenance of chromosomes 5 smc5 [Tribolium castaneum] (8e-150) |
| GeneOntology terms | GO:0005524 ATP binding GO:0005694 chromosome |
| InterPro families | IPR003395 RecF/RecN/SMC |
| Orthology group | MCL14400 |
Nucleotide sequence:
ATGTCTAGAATAATAAATAAAGGAAGTTTCAAACCCGGTAGTATATATAGAATAGCGCTA
GAAAACTTTGTAACCTATAAAGAGGTGGAATTTTATCCAGGCAAATCATTGAATTTAATA
ATCGGACCCAACGGAACTGGGAAATCAACATTTGTTTGTGCTATAATACTAGGCCTCTGT
GGAAATCCTAGGGCTATTGGTAGATCGAAAAACTTGGAAGGTTTTGTCAGACAGGGGTGT
GAGAGAGGATCTATAGAGATAGAGTTATATAATAAACCTGGTGAGAGGAATATCATTATA
AAAAGGACACTGGATGCAAAGAAATGTTCATCAATATGGAGCTTGGATTACAAAACTGTA
ACGGAGAAAAGAGTTCAAGAAATTGTTAAATCACTTAATATTCAGGTCGAAAATCTCTGT
CAATTGCTACCACAGGATAAAGTCCACGATTTTTCTAAGTTGAATCCCAAAGAACTATTG
CATAGTACATTGACAGCTATCGGGGACTTTGATAGTATTAAAGATTGGGACAAATTGATC
AAGCTGCAAAATGATCAGAAGGAATTGACTTCGACTCTCAAAAATGGCGAAACAAAACTA
CAAGAGGAAAAGAGAAAAAACCAAGGATTAAAAGAAGTGATCGATGCTATGAATCAGAGG
AAAGCTATAAAGAGGGAGATAAAGATTTGTGAGAAGAAGCTGTTGTGGGCCGAGTACAAG
GAGCTGTATGATGCTGTGGAGGAGATCAAGAGGCAGCAGGTCGAGGCCAAGAGAGTGGTT
GAGGAGAATAATAATGTCATTGAACCTATGAAACGTGAACTGGATGCGATGAAGCAGCGT
ATCGGTGTGTTGGAGAGCGGGAAGCGACGGAGTATTGAAAAAATTCGTGATCTCAAAGCT
AAACTGCAAGAGACGATATCGACTTTTGAAATACACGAATCGAAGCTGAACGGGATAGAC
AGAACGTTTCAAGAGAAATATGACGCGCAAAGGAATATAGAGAGAGAATTGACGGAGGCT
AGGATCGAAGAGGAAAAACTACAATCGGATAAGAGGGAGCTGGAAGAGAAGGGTGGGAAC
GAACAGAGCTTGATATTGGAATTACAAAAATTTGAGAAAGAAAGGGCTATAATAAATGCA
ACGCTTGAAACATATAGGAATAGCAGAGGGCGCCAGTTTTATCCGTTGGACAACGAAATG
AGATCGCTCACACATAAGATAAAGAGTTTGGAAAACGTTGAAAGGGGCCGTCTCGACAAA
CTGAAGACTAAACATAGAGATACATATAAAGCGTGGGTCTGGCTGAAAGAGAATATGCAC
GAGTTCAAACACCCTGTATATGGACCGATGATGCTTAACATTAACTTCAAAGAACCAAAA
TTCGCACGTTATTTAGAATCCACGGTGCCGGTGAGGGATTTGAAGGCTTTTACGTTTGAA
TCCAAAGAGGACATGAACAAGTTCAATAAGATAGTTCGAGAGGAGTTAAAATTAAGACAA
GTGAATGCTGTACACAGTGAAGGAGGAGATTTTGACATACGGCCCATAGATATAAGAAAC
TTGAGTTACTTGGGATTCTACACGTGTATCCTGGACACGATCTCAGCTCCAGCCGCCATC
TTGCGCTACCTGTGTTCTGTGTATCGTGTTCATGATATACCGATTGGGAACAACCATACA
TTTGACAACGTCGAAAGAGTTCCAGACAAGATTAGGTTTTACTTCACAGAAAAGCATAGA
ATTAGTGCGCGAGTGTCGTACTACAAGGTGCGGTCGACTACGACCATAGAAATAAGAAAC
GCGGATCTGTTAGCGGACAGTGTTGATTATGAATATGTTAACGCTTTGAAATCTCGGTTA
TCTGAGGTACAAAAAGAGAAGACAAATTTGGAGAGTCAATACGAAGCGAGACTGAATGTA
GAAGGAGATAAACTGAAAGAAATAGTTGGAAAAACAAAGGAGAAGACTGACTCGTTAGAG
AAGATTAAATCCATAAATCTAAAAATACACTTCCAAAAGCAAAAAGTTCTTGCATTAGAA
AGCGAACCGGCCATAAACATAGAGGCGGAAAAGAGGAAGTGCAAAGAAGATAAACAAGAG
TGCGTCCACAAACAGTGCGCAGCGCAGAAGGAGATGTACAACATATTACAACACATACAC
GAGGAGACAGTCAACATGGAGAAGAATACGATTCACTTATCTGTACATAGAAACGAATTC
GTTCAAAAGGAAGCCCAATATAGAAGATTAACAAGCGAGTTCGAGGCGGCCAAGACGATA
CTAGAAAACGTAAACAACGATATGAAAAGAGCGAGAACGAGAGCGAAGGAGAAGCTGGAA
CAAGCGAAGTCCAGCTGCGGAGACAAGATGATCAACGCGGACGACTTCCCGTACGCGGAC
GAGTTCAACGACCTGCCCTCGGACAGAGAACAGCTGCAAATGTACAGGAGCGAGCGAATG
GCCAAAGTATCGCTCATGGACAAGGGTGACAACCAGGTACTAAAAGAATATGAGGATAGA
GAGAGGGAGATAAGGAATCTTGAAAAGAAATTGAGTTCGTCGACCGACACCAAGAAAATG
ATAAGAGATGAAATTAAAACGATAACATCAAGATGGCTGCCACCGCTGGAAAATCTAGTG
AGTGAGATCAGAGAGAATTTCTCATCCATGTTCCAGAAGTTGGGGTGTGTCGGTGACGTC
ATACTGTACAAGGGAGCCAATGATGAGGAGTTCTCGTGTTACGGGCTACACATCATGGTG
CAGTTCCGTGTTGGTGAGCGTCTGCGACAGTTGACTAGAGACACACAGTCGGGCGGGGAG
AGGGCGTTGTCTACGGCCCTATACCTCCTTGCTCTACAGGCAAGGGTCGCTGTACCCTTC
AGATGTGTGGATGAAATCAACCAAGGAATGGATGCGAAGAATGAAAGGGACATGTTACAG
TTACTGATCAAGGCGACCACTGAATCCGATTCCCAGTACTTCCTCCTCACACCAAAGGTA
ACGGACTGA
Protein sequence:
MSRIINKGSFKPGSIYRIALENFVTYKEVEFYPGKSLNLIIGPNGTGKSTFVCAIILGLC
GNPRAIGRSKNLEGFVRQGCERGSIEIELYNKPGERNIIIKRTLDAKKCSSIWSLDYKTV
TEKRVQEIVKSLNIQVENLCQLLPQDKVHDFSKLNPKELLHSTLTAIGDFDSIKDWDKLI
KLQNDQKELTSTLKNGETKLQEEKRKNQGLKEVIDAMNQRKAIKREIKICEKKLLWAEYK
ELYDAVEEIKRQQVEAKRVVEENNNVIEPMKRELDAMKQRIGVLESGKRRSIEKIRDLKA
KLQETISTFEIHESKLNGIDRTFQEKYDAQRNIERELTEARIEEEKLQSDKRELEEKGGN
EQSLILELQKFEKERAIINATLETYRNSRGRQFYPLDNEMRSLTHKIKSLENVERGRLDK
LKTKHRDTYKAWVWLKENMHEFKHPVYGPMMLNINFKEPKFARYLESTVPVRDLKAFTFE
SKEDMNKFNKIVREELKLRQVNAVHSEGGDFDIRPIDIRNLSYLGFYTCILDTISAPAAI
LRYLCSVYRVHDIPIGNNHTFDNVERVPDKIRFYFTEKHRISARVSYYKVRSTTTIEIRN
ADLLADSVDYEYVNALKSRLSEVQKEKTNLESQYEARLNVEGDKLKEIVGKTKEKTDSLE
KIKSINLKIHFQKQKVLALESEPAINIEAEKRKCKEDKQECVHKQCAAQKEMYNILQHIH
EETVNMEKNTIHLSVHRNEFVQKEAQYRRLTSEFEAAKTILENVNNDMKRARTRAKEKLE
QAKSSCGDKMINADDFPYADEFNDLPSDREQLQMYRSERMAKVSLMDKGDNQVLKEYEDR
EREIRNLEKKLSSSTDTKKMIRDEIKTITSRWLPPLENLVSEIRENFSSMFQKLGCVGDV
ILYKGANDEEFSCYGLHIMVQFRVGERLRQLTRDTQSGGERALSTALYLLALQARVAVPF
RCVDEINQGMDAKNERDMLQLLIKATTESDSQYFLLTPKVTD