| New model in OGS2.0 | DPOGS201308 |
|---|---|
| Genomic Position | scaffold2433:- 18648-21672 |
| See gene structure | |
| CDS Length | 1620 |
| Paired RNAseq reads | 615 |
| Single RNAseq reads | 1868 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA003057 (0.0) |
| Best Drosophila hit | larval visceral protein H (2e-150) |
| Best Human hit | neutral and basic amino acid transport protein rBAT (1e-76) |
| Best NR hit (blastp) | alpha amylase [Bombyx mori] (0.0) |
| Best NR hit (blastx) | alpha amylase [Bombyx mori] (0.0) |
| GeneOntology terms | GO:0004558 alpha-glucosidase activity GO:0006006 glucose metabolic process GO:0005975 carbohydrate metabolic process GO:0043169 cation binding |
| InterPro families | IPR017853 Glycoside hydrolase, superfamily IPR006047 Glycosyl hydrolase, family 13, catalytic domain IPR015902 Alpha amylase IPR006589 Glycosyl hydrolase, family 13, subfamily, catalytic domain IPR013781 Glycoside hydrolase, subgroup, catalytic core IPR013780 Glycosyl hydrolase, family 13, all-beta |
| Orthology group | MCL10053 |
Nucleotide sequence:
ATGGACAGTGACGGTGATGGTATTGGAGATCTTAAAGGAATAACATCTAAACTGGAATAT
CTAAAGGAACTTGGAGTTGGAGCGACATGGTTGTCTCCAATGTTTCAGTCTCCTATGTAC
GATTTTGGATATGACATTTCCGATTTCTACAATGTTCATAATGAATATGGAACTATGGAA
GATTTTGACAATTTAATCAAGAAGGCGAATGAACTAGATATTAAAATAGTACTCGACTTT
GTACCAAATCATAGCAGTAACGAGAGTTTCTGGTTTGAAGAAGCCTTGAAAGGCGATGAA
AAGTATTATGACTATTTTGTGTGGGAGGACGGAGTAATTGATGAAAATGGTGTAATGTAT
CCTCCGAATAACTGGAATAGCGTTTTTCGCAAAAGTGCCTGGGAATACAGGGAAGAAGTA
GGGAAATACTATCTTCACCAGTTTGTAATTGGTCAACCAGATTTGAATTATCGTAATCCA
GATGTGGTAGAAGAAATGAAAAATGTTATTAGGTTTTGGTTGGATAAGGGTGTAGCTGGT
TTTAGAGTAGATGCAATTGCTCATTTATTCGAAGTTGATAAGGAACTGTTCGGTGGCAAG
TACCCAGATGAGCCTTTGAGTGGACAAAGTACACATGACCCACAAAATTATGATTATCTT
GATCATATCTATACAAAAGATCAGGAAGAGACATTTGACATGGTATACCAGTGGAGGGAA
GTATTTGATGAATATAAAGAAAAAGATGGTTTAACTAGAGTAATGATGACAGAAGCTTAT
TCGAGTCCACAAATAACTATGAAGTATTTTGGAAATGGAGAAAAGGAAGGTGCTCAAATG
CCATTTAATTTTGTCCTTATATCTGACGTAAATGGAAAATCGACTGCTGCTGAAATGAAG
TACGCTTTGGATAAATTTCTGACTTTTAAACCAATGGACAAATTAGCTAACTGGGTGGCT
GGGAATCATGATAATAACAGGGTCGCTTCAAGATTCAGTCCCGAGTTAGTAGATGGTATA
AATATGATTGTGTTGTTACTTCCAGGAATCGCCGTGACATATATGGGCGAAGAAATTGGT
ATGGTTGATGGCTTTGTTAGTTGGGAAGACACCGTTGATCCCAGCGGTTGTAATACGGAT
GATCCTATAAATTATGTATCAACTTCTCGCGACCCCGAACGGACTCCCTTCCAATGGAGT
TCAGAAAAGAATGCAGGCTTTTCTTCCGCTGATAAAACTTGGCTGCCAGTCGCCGAGGGC
TATGAAAATTTAAATGTCGAAGTACAGCGCAACGTGGAGAGGTCACATTTGAATGTTTAT
AAAAAAATTGTTAAATTGAGAGCAGAACCTGCATTTCGGTATGGCAGATACGAATCGGTG
GCTTTTAACTCAGATATCCTAGCGTTTAGGAGATGGCACGATGGCGATGTATATGTGGTT
GTGATTAATTTACGTGAACAGGCCTACACAATAGACCTTTCGTACTTCGATAACGTTTCC
GGAGGTCTTGAGATTGTTGTTAATAATATTCATTCAGAAAAGAATATCGGAGATGTTCTT
GAAGCCGAGAGCCTCAGCGTAGCTGGCAATGAATCTTTAGTGCTAAAATTAGTCAAGTGA
Protein sequence:
MDSDGDGIGDLKGITSKLEYLKELGVGATWLSPMFQSPMYDFGYDISDFYNVHNEYGTME
DFDNLIKKANELDIKIVLDFVPNHSSNESFWFEEALKGDEKYYDYFVWEDGVIDENGVMY
PPNNWNSVFRKSAWEYREEVGKYYLHQFVIGQPDLNYRNPDVVEEMKNVIRFWLDKGVAG
FRVDAIAHLFEVDKELFGGKYPDEPLSGQSTHDPQNYDYLDHIYTKDQEETFDMVYQWRE
VFDEYKEKDGLTRVMMTEAYSSPQITMKYFGNGEKEGAQMPFNFVLISDVNGKSTAAEMK
YALDKFLTFKPMDKLANWVAGNHDNNRVASRFSPELVDGINMIVLLLPGIAVTYMGEEIG
MVDGFVSWEDTVDPSGCNTDDPINYVSTSRDPERTPFQWSSEKNAGFSSADKTWLPVAEG
YENLNVEVQRNVERSHLNVYKKIVKLRAEPAFRYGRYESVAFNSDILAFRRWHDGDVYVV
VINLREQAYTIDLSYFDNVSGGLEIVVNNIHSEKNIGDVLEAESLSVAGNESLVLKLVK