New model in OGS2.0 | DPOGS204341  |
---|---|
Genomic Position | scaffold794:- 37182-57227 |
See gene structure | |
CDS Length | 4386 |
Paired RNAseq reads   | 2711 |
Single RNAseq reads   | 7028 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007244 (5e-134) |
Best Drosophila hit   | something that sticks like glue (2e-92) |
Best Human hit | E3 ubiquitin-protein ligase RBBP6 isoform 2 (4e-75) |
Best NR hit (blastp)   | PREDICTED: similar to GA16823-PA [Nasonia vitripennis] (3e-129) |
Best NR hit (blastx)   | PREDICTED: similar to GA16823-PA [Nasonia vitripennis] (5e-122) |
GeneOntology terms    | GO:0005515 protein binding GO:0008270 zinc ion binding GO:0005634 nucleus GO:0003676 nucleic acid binding |
InterPro families    | IPR014891 DWNN domain IPR001878 Zinc finger, CCHC-type IPR001841 Zinc finger, RING-type IPR013084 Zinc finger, CCHC retroviral-type IPR013083 Zinc finger, RING/FYVE/PHD-type |
Orthology group | MCL40140 |
Nucleotide sequence:
ATGTCTGTGCACTACAAATTCAAAAGCGCATTGGATTATGACACCGTTACTTTTGATGGC
TTACATATATCTGTAGGCGATTTGAAAGCGGCTATTTCACAGCAGAAGCGAATAGGAAAA
ACTTCGGATTTTGATCTTCAAATTACTAATGCTCAGACAAAAGAAGTCTATGTGGATGAC
AACACATTAATTCCAAAAAATACTTCATTGCTCGTGGCCAGAGTACCACTTGCTCAGCAG
CCAAAAAAGCAGTGGGAAGGTGCAAGCAGTAGTCAATCAAATCCTCTAAAAGATGTTACC
CTCAATAAGGGATTGGCGGACTTGTCTCGCATGGAGGGTAGTGAACAGGATAAAATTAAT
GCTATGATATCACAGTCCACATTTGATTATGATCCAAGCAATTATCAAAAAATCAGAGGG
CAGAATCAACGAGGAGCTGTACCATCTAATTATATTTGTTACAAGTGTCAGAAACGTGGT
CATTGGATCAAAGACTGCCCAGCAGCTCTTTCCGGTGATCCAGTAGAGATAAGAAGAAGT
ACAGGTATTCCCCGTAGTTTTATGGTGCCAGTTGATGGGCCTAAGGCACCAGGAGCCATG
ATGACCCCAAGTGGAACTTTTGCTGTGCCAGCAGTGGATCATGAGGCATATTTAGCATCA
GAGAGTGCTGGAGGAGCTGATACGCCAACAAATGCTCCCGTAGCTCCAGAACCAACAATT
CCTGATGAATTAATTTGCAGTCTCTGTAGAGATCTGCTTACTGATGCTGTCATGATACCA
TGCTGTGGAAATTCCTTTTGTGATGAATGCATAAGAGGAGCATTGTTGGAATCTGAAGAC
CATGAATGTCCTGACTGTCGCGAGAAAGAAATTGCGCCTACTACATTGATTCCTAATAGA
TTTTTAAGAAATTCAGTATCGTCATTTCGTAATCAAACCGGCTACAGCCGACGAGCGCCA
CACCGACCCTCGGCTGCCCCGCCAGTTATTGAACCACCTCCAGTTGCACCGGTCCAACCT
ATAAATATAAACGGCCCGCCCCAACCAGCGCCCCTCAATAACGGTCCTCCTGTTAAACCA
CCTGAGATGGACACGCCGCCGTTACATATGCCTCGAATCGATGAACAACGAGCGAGCACA
CCGACAATAGACGAACGCAGGGATGTTATTTCTTCTCAGGTGATTTATAATCGCGGTCCA
CCGCCGTACTTGCCCGCCGTGCCGCCTCCGTCTCAGCATTACCCTAATCCTGCTTTCGGT
CGTCGCTACCCTCAAGACGCGTACCAGCCACCACCTCCAGGCATTAAGGACTCCCCCAAC
GGGTCTCCGTCTCCTCGGCGCCGTCACCGCTCCCCCCTCCGTTACCGCAGCCCCCTCCGC
TCCCCGGCCCGCTCCCCTCCGCGCTCCCCCCGCACCCCGCTCCGCTCCCCTCACCGCTCG
ATGCCGCCACACTCGCCGGTGAGAACGCCGCGACGATCCGCCGCCAGGTCGCCGCCGAGG
ACTCACTCGCCTCACAGATTCGCCGGCGTTTACGATGAACTGTTGTCGCCACCACGTCGT
AGTGTAGAGCCGCCATTCGGAGCCAGGTACGCCTCTCGAAACAATATTCCGCCGCCTGGA
TATCCTCCTATCACTAGTAAACCAATGCCTTTAATGGCAAATTTAATCTTACCCAACGAG
CCCCCTCCGGGTTATCGCAGTCGTTACGATGCGCCACCATTTGAAGATATTCCACCTGGA
GTTGAACCGACTGTTCCAGGATTTGAGCCATCTCCATTTGAGAAACCTATTTTTGGACCA
TCAGGTACTATGGAAAGAGATAGATTACCACCATCTAATTATAGAGATCCCTATAGAGCA
CCGTACGTCGAGGGTCCGGCTGGATATAGGGATAACCAAATGCCACCACTTCAAAGTGAT
ATACCAGGTCCCATAGCGGAGCATTCCCAACGTTATAGAGATAACTTTAGAGCTACAACA
CACCCATACCGTGATCAAGGTCCAGTATCTTATAGAGATGGACAACCATACCGAGAAACT
GGATCTCAGGCTTCATTCCGCGATAATAACTTTAGAAATGGGCCACCCTCTCTTTTTAGA
GACAACAATTTTAGAAACAATCCATATAGGGATCCGAATTTCCGTGAAAATGTCCCACAT
AATTTCCGTGATGGATCTGCGCCTTTTAGACCGCCTAGCGTGGATCCCCGAGAGCCAAAT
TCTGTGGTGTATCCTGATCCTAATTACAGAGAAGGTTTTCGTGATGAAAATAACACTAGT
AGGGATGTGCGACCTGGGTATCGTGGTAGTGTCCGCAACAGAGGTGGTTCTAGGCGTAAT
CCAAATGACCATGAAAGACATCGTGAGAGAGACGGACGAGAAAGAGATCGTTTCAATGAA
AATCGTGAAGCTCCCGATCGTACAGAAAGACCACGTGATGTTGATAAGAGATCTGGTAAT
AGAGAAAACCGTGAAGAACGCTCTAGAGAGTATGATAGAAATCGAGATTATGAAAAAGAA
AGAGATCGTGGTCACGAGAAACAATCCCCAGATAGAAAACAACGTGTCTCACCCAAACGT
AGTCGAGATACCCGTGAAAGAAAACAAAGTGAAACGAGGGCCCGTTCTCGTGATCGGGAA
AGTAGGAAAGAAAAGAAAGAAGAACGTACACGTGATAAATCATCAGCGGAAAGAAATAGA
GATCATAAAGAGAAGGATAAAAAGGTTAAAGATAGGAAAAAGAAAAAGAGAGAAAAAGAA
AAAGAAGTTGAGAAGAAAAAAAAGCGCGATAAAAAGGACAAAAAAGATAAAGATGTAATA
AAGAAAGAAGAAGACGAACAGGAAATATCGGATTCTAAACAAGATGCTAATGCAGAGCCT
AAAGAAAATACTGATCAGACTCTTGAGCTCAAAGCAGAAAATCCTGAATCATTAACAAAA
ACTACCGAGAATGATAATCTTGAAAAATCTGATATTCAAGAAAAAACTAATAATGACCTG
TACGGTGACGAAGGTACTGAACTACTAGGGAAGGAAGTACAAACCTATAACAAAACCGAA
GAAAAGGAGGACGTCAATGAAAACAAGTCTATTGAGACATTAAACAAAGAAGAGCCGTTT
GACGGTATTGAACTTCAGGTGCCAACTGATGAATTGGAAGTGGATATCGAAGCTACACCT
AAAAATAATAATAACAAAGAAATGTTAGCGCCACTACCCGCTTTATCAAAATGGGAAGTT
GAAGATGATAATGTTGAAAAGTCTAAGGAACCAGGTGAAATAACCTCACCAGAAGAAGAA
GAAGACGGAGGTAAAGTAACGTCTGAGGTTATAAAACGTGCTGAAAATGCAATTTTTTCC
AAAGCCATTAGTACGTTGCGACCTATAGAAATTAAGAAGATTAGTAGCGATCGATTGAAA
CTGTATAGCGATGACACTCAAATAAAGGGTTCTTTAGATAACATACAAATCACTGTTCCT
GTGTTGAATGAGGATCAACAACTAGCAGATCCCAACAAAAAGAAAAGATATTCAAAAACA
CCTCCTCCTCGACTGTCAGTCAAAGAAAGACTCGGGGGAAAAGTTGAAGAGGTTCGAAAA
GTACGAGAACCTCGAGTCGTCCAAAGTACAGTTGAAAGAGTAAAATCCAGGTCAAAAACA
CCTAAACATGAGCAGATACCTTACCGTCGAGTAACTGTTGAAAGAGATCGAAATCGAAAG
CCTGAAATAGTGGCCAGGTTAGACGGATTAAAGGGTGAAAGAAAAATTAGTTCTGACGTA
CAAAAACCCGACGAAAGTTATCGTTTCAACAATGACAATGATTATAAGAAAAGGCATTAC
GGAAAAGTTAAAGATGAAATGAAGTCTATAAATGATAGACTTGATACAAACTCACAAAAC
ATACAAAAAAATGACATTACTCAAGAAGTTAAAGTTTTAAATGAAAGAGAACGTAAAAAA
TCTGTCTTAGACGAAGCACACTTCGAACCCGATTATGATGAAAATGTTGAATCTGATAAT
GAAGCAAAAGTTGAGCCTGGGAAGAAACGTGAACATTCCCGGGATCCGTTAATCGCTGGA
ACTAATGAACCAAAAAAGGCAAAATTCGACACTGAAACAATTAAATTAGATCTGACGAAC
GTCAAAAAGAAACCAGATTCTGACAGCGAATCATCGAGCGATTCTGAATATTCTTATTCC
TCCTCATCATCTGACGCTCGCAAGCGTAAAAAGAAAAAGAAGAAAAATAAAAAGAAAAAG
AAACGAGCTGCCAGCGACAGCGATAGCGAGTCGGACTCCAGCTCCGACGATCATAAGAAA
AAGAAGAAGAAACGTAAACATAAGAAGAAATCGAGTAAGAAGAAAAAGAAGTCTAAACAT
AAGTAG
Protein sequence:
MSVHYKFKSALDYDTVTFDGLHISVGDLKAAISQQKRIGKTSDFDLQITNAQTKEVYVDD
NTLIPKNTSLLVARVPLAQQPKKQWEGASSSQSNPLKDVTLNKGLADLSRMEGSEQDKIN
AMISQSTFDYDPSNYQKIRGQNQRGAVPSNYICYKCQKRGHWIKDCPAALSGDPVEIRRS
TGIPRSFMVPVDGPKAPGAMMTPSGTFAVPAVDHEAYLASESAGGADTPTNAPVAPEPTI
PDELICSLCRDLLTDAVMIPCCGNSFCDECIRGALLESEDHECPDCREKEIAPTTLIPNR
FLRNSVSSFRNQTGYSRRAPHRPSAAPPVIEPPPVAPVQPININGPPQPAPLNNGPPVKP
PEMDTPPLHMPRIDEQRASTPTIDERRDVISSQVIYNRGPPPYLPAVPPPSQHYPNPAFG
RRYPQDAYQPPPPGIKDSPNGSPSPRRRHRSPLRYRSPLRSPARSPPRSPRTPLRSPHRS
MPPHSPVRTPRRSAARSPPRTHSPHRFAGVYDELLSPPRRSVEPPFGARYASRNNIPPPG
YPPITSKPMPLMANLILPNEPPPGYRSRYDAPPFEDIPPGVEPTVPGFEPSPFEKPIFGP
SGTMERDRLPPSNYRDPYRAPYVEGPAGYRDNQMPPLQSDIPGPIAEHSQRYRDNFRATT
HPYRDQGPVSYRDGQPYRETGSQASFRDNNFRNGPPSLFRDNNFRNNPYRDPNFRENVPH
NFRDGSAPFRPPSVDPREPNSVVYPDPNYREGFRDENNTSRDVRPGYRGSVRNRGGSRRN
PNDHERHRERDGRERDRFNENREAPDRTERPRDVDKRSGNRENREERSREYDRNRDYEKE
RDRGHEKQSPDRKQRVSPKRSRDTRERKQSETRARSRDRESRKEKKEERTRDKSSAERNR
DHKEKDKKVKDRKKKKREKEKEVEKKKKRDKKDKKDKDVIKKEEDEQEISDSKQDANAEP
KENTDQTLELKAENPESLTKTTENDNLEKSDIQEKTNNDLYGDEGTELLGKEVQTYNKTE
EKEDVNENKSIETLNKEEPFDGIELQVPTDELEVDIEATPKNNNNKEMLAPLPALSKWEV
EDDNVEKSKEPGEITSPEEEEDGGKVTSEVIKRAENAIFSKAISTLRPIEIKKISSDRLK
LYSDDTQIKGSLDNIQITVPVLNEDQQLADPNKKKRYSKTPPPRLSVKERLGGKVEEVRK
VREPRVVQSTVERVKSRSKTPKHEQIPYRRVTVERDRNRKPEIVARLDGLKGERKISSDV
QKPDESYRFNNDNDYKKRHYGKVKDEMKSINDRLDTNSQNIQKNDITQEVKVLNERERKK
SVLDEAHFEPDYDENVESDNEAKVEPGKKREHSRDPLIAGTNEPKKAKFDTETIKLDLTN
VKKKPDSDSESSSDSEYSYSSSSSDARKRKKKKKKNKKKKKRAASDSDSESDSSSDDHKK
KKKKRKHKKKSSKKKKKSKHK