New model in OGS2.0 | DPOGS204331  |
---|---|
Genomic Position | scaffold794:+ 20844-26143 |
See gene structure | |
CDS Length | 1692 |
Paired RNAseq reads   | 1066 |
Single RNAseq reads   | 2908 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA007228 (5e-08) |
Best Drosophila hit   | nutrient amino acid transporter 1 (2e-120) |
Best Human hit | sodium- and chloride-dependent glycine transporter 2 (1e-79) |
Best NR hit (blastp)   | potassium coupled amino acid transporter [Manduca sexta] (0.0) |
Best NR hit (blastx)   | potassium coupled amino acid transporter [Manduca sexta] (0.0) |
GeneOntology terms    | GO:0005283 sodium:amino acid symporter activity GO:0005887 integral to plasma membrane GO:0006814 sodium ion transport GO:0015175 neutral amino acid transmembrane transporter activity GO:0015804 neutral amino acid transport GO:0042940 D-amino acid transport GO:0042943 D-amino acid transmembrane transporter activity |
InterPro families   | IPR000175 Sodium:neurotransmitter symporter |
Orthology group | MCL10123 |
Nucleotide sequence:
ATGAATAATTCAGAGAAAGGAGGCAACGTCAACCCTGGGTTCGAGATATCTGAACCTAGG
AAGTCACTTGACGCAAAGTTCCCTGACAATGTCATCAACGAAAAGGGCGAAGAAGACGAT
GAGGAAGACTCACGGCCGATGTGGGGAAACCAACTCGAATTTCTTATGTCATGTATTGCT
ACATCAGTCGGGCTTGGTCTCGGATATGCACAAGCTTTGGCCTGTGGTTATATTCTCTCC
TACTACGTATCAATCATCGCTTTATGTATCTACTATCTTGCCATGAGCTTCCAAGCCCCC
TTGCCGTGGGCGGTATGTGATCCTTCCTGGGTAAATTGTGTGCCCTCATCTAGTACAGGG
GAGAATGCTAACGTGGTTAATGGAACAAGTAGTGCTGAATCATATTTCATAAAAACTGTT
CTTCAGCGGAACAATGGACTTGAAGAGGGCCTTGGTCTTCCTGTTTGGTACCTGGTACTT
TGCCTGTTAGCGTCCTGGATAATAATCTTTGTGATCGTTTCAAGAGGTGTTAAAAGTTCA
GGCAAAGCATCATACTTCTTAGCACTCTTCCCTTACGTGGTGATGATTATTCTTCTTATC
AGTACAGTAATTCTTCCCGGAGCTGGGAACGGTATTTTGTTTTTCATCACACCAGAATGG
AATAAATTGCTGGAACTTGATGTATGGTATGCTGCTGTCACACAGGTGTTCTTCTCTTTG
ACAGTCTGCAACGGACCCATTATTATGTTCTCCTCTTATAATGCCTTCAAACAAAACGTA
TACAGAGACGCGATGATTGTTACTACTTTAGATACCTTCACCAGTTTGTTATCCGGAGTC
ACAATTTTCGGTATTCTTGGAAATTTGGCATACGAATTAAGAAGAGAAGTTGGTGAAGTT
GTCGGTTCTGGAGGAACGGGACTCGCTTTCGTTTCCTACCCTGATGCTATTGCTAAGACT
TTCCAACCACAGTTATTCTCAGTGCTCTTCTTCTTGATGATGACTGTACTTGGTATTGGA
TCAGCTGTAGCACTCTTGTCATCTATTAACACGCTTCTGTTGGACGCTTTCCCTCGCGTT
AGAACTGTCTTCATGTCTGCCTTCTCATGCACTGTCGGTTTTGCTTGTGGTCTTGTGTAC
ATCACGCCTGGTGGAGCATATGTATTGGAGTTGGTTGACTATTATGGTGGAACTTTCCTT
GTTCTTTTCTGCGGTATCATTGAAGTTATAGGTTTCTTCTGGATTTATGGACTGGAAAAC
GTATGTTTGGACATAGAATTCATGTTGAACATAAAGACCTCTATATACTGGCGTTTCTGT
TGGGGTTTCATTACACCAGCTATGATGGTTGTCGTCTTTGTTTACGCTCTCATGTCCTTC
GATAGTTTAGAGTTCGCTGGATATACTTACCCATTAGCTGGTTATGTTTCTGGATACCTG
ATGTTGTTCGTTGGAGTTTTCTTTGTTCCTCTCGTTATTCTGCTGACATTCTACAAATAC
AGAAGCGGCAGTTTCTATGATACCCTGAAGAAGTCTTTTACACCCAAAGAATCTTGGGGT
CCCAGGTCTGCAAAGACTAGACGCGAATGGAAACTTTTCAAAGAGGAAGTTGAAAGGGAA
AGAAGTATGGTGCCGAGATCATGGCTGAAACACGTCGGTTTAAGTCTGATAGGAGGATAC
AAACGTCCTTGA
Protein sequence:
MNNSEKGGNVNPGFEISEPRKSLDAKFPDNVINEKGEEDDEEDSRPMWGNQLEFLMSCIA
TSVGLGLGYAQALACGYILSYYVSIIALCIYYLAMSFQAPLPWAVCDPSWVNCVPSSSTG
ENANVVNGTSSAESYFIKTVLQRNNGLEEGLGLPVWYLVLCLLASWIIIFVIVSRGVKSS
GKASYFLALFPYVVMIILLISTVILPGAGNGILFFITPEWNKLLELDVWYAAVTQVFFSL
TVCNGPIIMFSSYNAFKQNVYRDAMIVTTLDTFTSLLSGVTIFGILGNLAYELRREVGEV
VGSGGTGLAFVSYPDAIAKTFQPQLFSVLFFLMMTVLGIGSAVALLSSINTLLLDAFPRV
RTVFMSAFSCTVGFACGLVYITPGGAYVLELVDYYGGTFLVLFCGIIEVIGFFWIYGLEN
VCLDIEFMLNIKTSIYWRFCWGFITPAMMVVVFVYALMSFDSLEFAGYTYPLAGYVSGYL
MLFVGVFFVPLVILLTFYKYRSGSFYDTLKKSFTPKESWGPRSAKTRREWKLFKEEVERE
RSMVPRSWLKHVGLSLIGGYKRP