DPGLEAN03191 in OGS1.0

New model in OGS2.0DPOGS204333 
Genomic Positionscaffold794:+ 58512-63920
See gene structure
CDS Length1824
Paired RNAseq reads  4131
Single RNAseq reads  11450
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA007230 (0.0)
Best Drosophila hit  Ef1alpha-like factor (0.0)
Best Human hiteukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform 2 (0.0)
Best NR hit (blastp)  Ef1alpha-like factor isoform 1 [Bombyx mori] (0.0)
Best NR hit (blastx)  Ef1alpha-like factor isoform 1 [Bombyx mori] (0.0)
GeneOntology terms




  
GO:0003747 translation release factor activity
GO:0006415 translational termination
GO:0005829 cytosol
GO:0008079 translation termination factor activity
GO:0005525 GTP binding
GO:0003924 GTPase activity
InterPro families




  
IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
IPR000795 Protein synthesis factor, GTP-binding
IPR004160 Translation elongation factor EFTu/EF1A, C-terminal
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
IPR009818 Ataxin-2, C-terminal
Orthology groupMCL10897

Nucleotide sequence:

ATGTCCAATAACGGTGCTCCGGACTCTTGGGAAGCTCAAGCCGATGTTATAGGTGAACAA
GGTGCAAAAGATTCTAATGATGTGTCTACAAAATTTTCCACGTTGAATGTTAATGCTGTG
GAATTCGTGCCTTCTTTCTGTATACCTTCCCAAGGTGACGACAGTACTGATTCACCGACT
TCATCACAAAAATCTGAGAGTGAATCTACTAATTCCGCTGAGAGTCCTGTCTTGAACGGT
TGTGGAGATGGTGTCGAGAGTGGTGATGGAAGAGCAGCATCTGCATCACCGAGAGTTGAG
GAGCCCCCTCCTGTCCCTCCAGCTGCCTCCACTGAGACACCTGTTCCTGTTCCATCTGAC
GTCTCCCCCACAGCTGATAGCTGGGAAGCTGAAGCCGACGATGCATTACTCACACCAGAA
GACACCAATGAAGTCGAGGAGGAAGAACTCGAACAACAGGTGCCATCCACTGAAGATGGT
GAAATCTCAAAGAAAATTCCGAAGAAAAAACCAGTCAGGGTTGAAGATACTCGCAGCAAA
AAGGAACATGTAAATGTTGTTTTCATAGGGCATGTAGATGCTGGTAAATCTACAATTGGT
GGTCAAATAATGTCCTTGACTGGCATGGTAGATAAAAGAACACTAGACAAATATGAAAGA
GAAGCAAGGGAAAAGTCCAGGGAATCTTGGTACCTCTCTTGGGCTTTAGATACGAACCAA
GAAGAACGTGACAAAGGTAAAACTGTGGAAGTGGGCAGGGCATACTTTGAGACTGAAAAG
AAGCATTTTACAATCCTCGACGCCCCCGGGCATAAGAGTTTCGTTCCAAACATGATAGGG
GGCGCCGCGCAGGCCGACCTCGCTGTACTTGTGATATCTGCTAGGAAAGGTGAATTTGAA
ACAGGATTTGACAGAGGGGGACAAACAAGAGAGCATGCTATGTTAGCAAAGACTGCTGGT
GTTAAGCATTTAGTTGCACTTGTTAATAAAATGGATGATCCCACTGTGAACTGGGATGAG
AAAAGATACAATGAATGTAGAGATAAAATTCTTCCCTATCTAAAAAAACTGGGATTCAAT
CCAGCAAAGGACTTATCCTTCTTACCAGTTTCGGGACAAACTGGTCAAGGTTTACTTGAG
AGAGTATCCGAAGAAATATGTACGTGGTACCGTGGTCCATCTTTTATACAATTAATTGAT
GAGTTGCCATCACTGAACCGCAAGATGGATGGTCCCTTCATAATGCCGGTAGTCGACAAG
TACAAGGACATGGGAACGGTTCTCATGGGTAAAGTTGAAGCGGGAACTACAAGAAAGGGC
AGCACTCTTTTCCTTATGCCTAATAGGGCACAAGTAACAGTCGATCAGTTATGGTCTGAC
GACATTGAAGTAACCTCTATTGGTCCCGGTGAAAATGTTAAAGTGAAGCTCAAAGGCATC
GAAGAAGAAGATGTCTCTCCCGGCTTTGTTCTTTGTGATACCGCAGAACCAATAACCACT
GGAAGAGTATTTGATGCTCAAGTGGTGATATTGGAACATAAATCAATCATTTGCGCTGGA
TATTCCGCTGTTATGCACATACATTGTGCGGCTGAAGAAGTTACTGTTAAGGCTCTAATC
TGTTTAGTTGACAAGAAGACTGGTGAGAAGTCAAAGACGCGGCCGCGGTTCGTTAAACAG
GATCAAGTGGCCATTATGAGGATAGAATGTGCGGGGATCATATGTCTAGAGCCGTTCAAG
AAGTTCGCACAGATGGGAAGGTTCACATTAAGAGATGAAAATAAAACAATTGCAATCGGC
AAAGTCCTAAAAGTGGTTGAATAA

Protein sequence:

MSNNGAPDSWEAQADVIGEQGAKDSNDVSTKFSTLNVNAVEFVPSFCIPSQGDDSTDSPT
SSQKSESESTNSAESPVLNGCGDGVESGDGRAASASPRVEEPPPVPPAASTETPVPVPSD
VSPTADSWEAEADDALLTPEDTNEVEEEELEQQVPSTEDGEISKKIPKKKPVRVEDTRSK
KEHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLDKYEREAREKSRESWYLSWALDTNQ
EERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGAAQADLAVLVISARKGEFE
TGFDRGGQTREHAMLAKTAGVKHLVALVNKMDDPTVNWDEKRYNECRDKILPYLKKLGFN
PAKDLSFLPVSGQTGQGLLERVSEEICTWYRGPSFIQLIDELPSLNRKMDGPFIMPVVDK
YKDMGTVLMGKVEAGTTRKGSTLFLMPNRAQVTVDQLWSDDIEVTSIGPGENVKVKLKGI
EEEDVSPGFVLCDTAEPITTGRVFDAQVVILEHKSIICAGYSAVMHIHCAAEEVTVKALI
CLVDKKTGEKSKTRPRFVKQDQVAIMRIECAGIICLEPFKKFAQMGRFTLRDENKTIAIG
KVLKVVE