| New model in OGS2.0 | DPOGS213530 |
|---|---|
| Genomic Position | scaffold66:- 284435-287045 |
| See gene structure | |
| CDS Length | 2256 |
| Paired RNAseq reads | 288 |
| Single RNAseq reads | 816 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011810 (0.0) |
| Best Drosophila hit | lethal (1) G0045 (6e-122) |
| Best Human hit | ribonucleases P/MRP protein subunit POP1 (3e-87) |
| Best NR hit (blastp) | GI14948 [Drosophila mojavensis] (2e-154) |
| Best NR hit (blastx) | GI14948 [Drosophila mojavensis] (1e-147) |
| GeneOntology terms | GO:0001682 tRNA 5'-leader removal GO:0004526 ribonuclease P activity |
| InterPro families | IPR009723 Ribonuclease P/MRP, subunit POP1 IPR012590 POPLD |
| Orthology group | MCL13947 |
Nucleotide sequence:
ATGACCGAAAGTATATTACGACCAAGTAAAACTAAACTAATTTTTCAATGCTTACCAGTT
CACATGCGTCGTAGGGTTATGAGCCACAACTGTAAACGTTTGCCTAGACGGTTACGTTTA
GGACATTTAGAACAGCTAAAGAAAAGTGGATCACCTCCAAAACAAAAGCGTCCATCCCGC
AAGTTCAGACGCCGTCCTACGAACCTTTTAAACGAATACAATAGACGGCAGAAAAATAAA
ATATGGCTCGAAACCCACATATGGCATGCGAAACGATTTCATATGGTAGAGCGTTGGGGT
CACCGTCTACCACACCGACCCTGCGACAAAGCGTTCAGAGCTTGTTATAGAGCCAGTTCT
GCACATTGTCTTTTGCAAGATATTTCTTATTACACACCTATTCAAATTAAGGGTCAAATA
GACAGTATAAAAGATATTTTTTGTAACATAACTAGTAACAACTGTGGATTAGGTATCTGT
GCAAAAGCTTTCTTAAAAGGCAATAGAAGAGGTACTATTGATTTATATATGAAAGATTGT
TACCCCTTTGGATTTGTTGGAAAAGTTGAATTTTTATGGGTGTGTATCAATGACTCTAAT
AAAGAACTTTGGCTCTTTGTTCATCCATCTCAAGTGAAACAAGTGGAATTACTTTTAAAT
GATATAACTAAAGCTGGTGAGAGTATGATCACTTCAGGTGCCGAGACGGACACAATTGCT
ACTAAAAAGAGAAAAATAAGTACTAAATATTCTGAAGTGCAAATCAATGTAAAATATAAA
TTATTCAATAGATTCCGTTTGACTGGGCCAAGGAGTCATGCAGTGTTAGTCAAGTCACTG
AAATGTGTTAAAGATGTGGAAAAGGTTGAAACAAATAAGTGGTTAGAGCACAGCATACAA
AGGAATACAAACTTATTTCTCAAGGAAAAATATGAATACTGGGAGAATGTTGGTCTCATG
AACTCCCCTGCACATATGCCACCGGGAGCAATTATCGGTTTGGTCGTAAAAGATCCTCGG
TTGAGTAGACCCTCAAAACGAACTAAAGCAGAAATAAAAAGTACAAAACAATGTAATATT
GAATTATTACTTAATAATCCACCACATACACCCAGATCACCATTATGGGATGAGACGGTC
TGTGATATTATTAAGAAAAATAAAGTGACTAACTCCGAATACATTGAACATATAACGCAG
ACACAGCTTATACCAGGCGAGGTAAATGAGGATGATCCATTCCTACAGAACCTTCCCATT
GTGTTACTACAGAGACCTGGTTCCCAAGATTCCTTTTATAAAAAAATTGGCTATGGTAGT
GGATGGGACATAATTTTACCAGCGGAATATGGTCTTCCATTCTGGTTAACATTTATTATG
TTTGGGGCTAGAACAGGCGGCCTGAGAGAAACGGAGAGTGTTGCTTTGGAAATGGGTGAA
ATTTACATGCCACCTGACTCTGAAGCTGGGTTATTAGAGGAGATGAGATTAGAATCAGAA
CTGAAAGAAAAGTATTTCAGAAGACCACCCAGCAAACGAGTTAATTACATCAAGCTCGCT
GTCCCTAGCCCATTCAAATGTCCCTGGAGTGTTTTATTAAAAGACTGGAGCGATAATAAA
CAAGAAAAATTTTATGTACTTAGAGATAAAGTGCTACTAGAAGAATTACAGGTTTGCATA
GACAGAAAAAAGCACATCCCACATATTGCTAACTGCGATGCTTGTTTGATACCTTTATAT
GTCAAAGTAGAAGGGAAAGGAAATTTAACGAGTCATGCCATGATATGTTTCCCACTTCCG
CAAGATGTGTGCTCTAAAAATCCTGTCATGGAACCTCACCACATGGATGAAAATCTAAAA
TTGAGACGTCAAAAAAGACAAGAACATAAAAAGTTATTGAAGCAAAAAAGAAGAAGACAA
ATCAAGCTGAAAGCAAAACAGAAATTATTAAATCAGGTTACGAAGCAAAAAGTTCAACAT
AACAAACATGAACCGTCAGATTACGTGAAGAGTATGAGAGAGTTATGGCTCCCGTCTAGC
AGTGACACCGTTAGACATGTTCCCAGCAGGCAGGTCATGGGATATATATCTCAAGCAGCA
TTTAGTTTTTCAGAAGCCAGGTGTTGCGGAATCGGTTATGTGGCCCTCAACGCCCTCAAC
CAGCTATTAGAGCAAAGAATTAATCAAGTTCTCATCAGAAATACTACTTCCAGAAAATAT
ACGTTAGCAAACATCAATATAATTAAAACACCGTAG
Protein sequence:
MTESILRPSKTKLIFQCLPVHMRRRVMSHNCKRLPRRLRLGHLEQLKKSGSPPKQKRPSR
KFRRRPTNLLNEYNRRQKNKIWLETHIWHAKRFHMVERWGHRLPHRPCDKAFRACYRASS
AHCLLQDISYYTPIQIKGQIDSIKDIFCNITSNNCGLGICAKAFLKGNRRGTIDLYMKDC
YPFGFVGKVEFLWVCINDSNKELWLFVHPSQVKQVELLLNDITKAGESMITSGAETDTIA
TKKRKISTKYSEVQINVKYKLFNRFRLTGPRSHAVLVKSLKCVKDVEKVETNKWLEHSIQ
RNTNLFLKEKYEYWENVGLMNSPAHMPPGAIIGLVVKDPRLSRPSKRTKAEIKSTKQCNI
ELLLNNPPHTPRSPLWDETVCDIIKKNKVTNSEYIEHITQTQLIPGEVNEDDPFLQNLPI
VLLQRPGSQDSFYKKIGYGSGWDIILPAEYGLPFWLTFIMFGARTGGLRETESVALEMGE
IYMPPDSEAGLLEEMRLESELKEKYFRRPPSKRVNYIKLAVPSPFKCPWSVLLKDWSDNK
QEKFYVLRDKVLLEELQVCIDRKKHIPHIANCDACLIPLYVKVEGKGNLTSHAMICFPLP
QDVCSKNPVMEPHHMDENLKLRRQKRQEHKKLLKQKRRRQIKLKAKQKLLNQVTKQKVQH
NKHEPSDYVKSMRELWLPSSSDTVRHVPSRQVMGYISQAAFSFSEARCCGIGYVALNALN
QLLEQRINQVLIRNTTSRKYTLANINIIKTP