| New model in OGS2.0 | DPOGS213531 |
|---|---|
| Genomic Position | scaffold66:- 273194-276140 |
| See gene structure | |
| CDS Length | 699 |
| Paired RNAseq reads | 1 |
| Single RNAseq reads | 8 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA011811 (2e-72) |
| Best Drosophila hit | spindle A, isoform A (2e-43) |
| Best Human hit | meiotic recombination protein DMC1/LIM15 homolog (2e-93) |
| Best NR hit (blastp) | Dmc1 homolog [Bombyx mori] (2e-113) |
| Best NR hit (blastx) | Dmc1 homolog [Bombyx mori] (2e-106) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0000239 pachytene GO:0000794 condensed nuclear chromosome GO:0001541 ovarian follicle development GO:0001556 oocyte maturation GO:0003677 DNA binding GO:0005515 protein binding GO:0005524 ATP binding GO:0005634 nucleus GO:0005737 cytoplasm GO:0006281 DNA repair GO:0007131 reciprocal meiotic recombination GO:0007141 male meiosis I GO:0007276 gamete generation GO:0007283 spermatogenesis GO:0007286 spermatid development GO:0008094 DNA-dependent ATPase activity GO:0017111 nucleoside-triphosphatase activity GO:0043231 intracellular membrane-bounded organelle |
| InterPro families | IPR013632 DNA recombination and repair protein Rad51, C-terminal IPR020588 DNA recombination/repair protein RecA/RadB, ATP-binding domain IPR020587 DNA recombination/repair protein RecA, monomer-monomer interface |
| Orthology group | MCL19650 |
Nucleotide sequence:
ATGACTACTAAAAAGAAGCTTTGTAATATAAAAGGATTTTCTGATGCGAAAGTAGAAAAA
ATAAAGGAAGCTTGTTTAAAAGTCGTCTCTTTAGGTTTTATGACCGCTCTAGAAGTCAGT
GATAAACGGAAGCATGTTTTTAAAATAAGTACTGGTAGTAGCGAGTTTGACCGTCCTGAT
AGGTTGAGACCCATTGCGGACAGATTTAATCTAGAACAAAACGCTGTACTGGACAACGTT
TTATACGCGAGAGCTTATACATCGGAACACCAGGCGGAACTGCTAGACTTTGTAGCTGCT
AAGTTCCACGAAGAGGCCGGCGTGTTCAAACTACTGATCATAGATTCAGTCATGGCGTTG
TTTAGAGTGGACTTCTCGGGGCGCGGGGAACTGGCGGATAGACAACAGAAACTCGCACAA
GTGCTCTCACGCCTGCAAAAGATATCCGAAGAGTATAATGTTGCTGTTTTTATAACAAAT
CAGATGACGGCAGACCCTGGTGCCACATTATCATTCCAAGCTGATCCAAAGAAGCCCATA
GGTGGTAATATCCTGGCTCACGCGTCAACCACAAGGATATATCTTAGAAAGGGAAGGGGC
GAAAATAGAATCGCCAAAATATATGATTCCCCAGATTTACCTGAAAGCGAAGTTACCTTT
GCCATCACTAATGGTGGTGTCGCTGACTCTAAAGATTAA
Protein sequence:
MTTKKKLCNIKGFSDAKVEKIKEACLKVVSLGFMTALEVSDKRKHVFKISTGSSEFDRPD
RLRPIADRFNLEQNAVLDNVLYARAYTSEHQAELLDFVAAKFHEEAGVFKLLIIDSVMAL
FRVDFSGRGELADRQQKLAQVLSRLQKISEEYNVAVFITNQMTADPGATLSFQADPKKPI
GGNILAHASTTRIYLRKGRGENRIAKIYDSPDLPESEVTFAITNGGVADSKD