| New model in OGS2.0 | DPOGS210300 |
|---|---|
| Genomic Position | scaffold50181:+ 324-5238 |
| See gene structure | |
| CDS Length | 1596 |
| Paired RNAseq reads | 806 |
| Single RNAseq reads | 2190 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013893 (0.0) |
| Best Drosophila hit | CG15828, isoform B (3e-86) |
| Best Human hit | apolipoprotein B-100 precursor (2e-20) |
| Best NR hit (blastp) | hypothetical protein TcasGA2_TC004643 [Tribolium castaneum] (1e-132) |
| Best NR hit (blastx) | hypothetical protein TcasGA2_TC004643 [Tribolium castaneum] (9e-128) |
| GeneOntology terms | GO:0005615 extracellular space GO:0008289 lipid binding GO:0005319 lipid transporter activity GO:0006869 lipid transport GO:0005875 microtubule associated complex |
| InterPro families | IPR001747 Lipid transport protein, N-terminal IPR011030 Vitellinogen, superhelical IPR015817 Vitellinogen, open beta-sheet, subdomain 1 IPR015818 Vitellinogen, open beta-sheet, subdomain 2 IPR015819 Lipid transport protein, beta-sheet shell IPR015255 Vitellinogen, open beta-sheet |
| Orthology group | MCL10722 |
Nucleotide sequence:
ATGATAATAAAGAAGGAAGTGGATTCAGATACACGACACGAATGGCTCATGTCAATGGCC
ATGATACCACGACCAAAAATAGAGATGTTAAAAAGTATGTTGGAACTTCTCCAGACACAG
AGGAATGATCAGGTTATAAGTTTCACTGTATCGTCCATGGTGCACTCATATTGCAAACAC
AGTAGAAAAGCATTAAGGGAATGTTGCGAAGAGGAAATCCCAAAGCAAATACTAGAAGAA
TTCCAAGATATAGTAAACGAAATAATAGGAAAAGGTGTAGCAAATGCTCAGAGAGAAGAT
AGAGATAATCTCGTTAAAGCGCTTAAAGCGCTAGGCAACATCGGTGGCTTCAAACAGGAG
TTTGCGGATGTATTAATGAATATAATTGGCGATTCTCTGATTCCTGTACCCACTAGATTG
ACGGCTATAGACGCGTTCAGGCGAACACCCTGTACGGAGACCAGGGAATACTTCTTAGAA
ACATACAGAGCCGACCTCGTTGATGTTGAAGTCCGAATCGCTTCGTATTTGCAAGTCATG
AAATGCCCCAATCTAAGTACAATTCGAAAAATTTTCCACTCCCTCAAAAAAGAACCTGTT
AACCAAGTGGCAACCTTCGTTTGGAGTCACCTGAACAATTTAGGTCAATCTTCTCTACCA
TCAAGAGTGGAAATCCAAGGACTTTTATCTGGTAACACAGTACCCCAATTGGAAGATAGT
CCAGATTTTAGAATGTTCTCAAGGAATTATGAGCAGAGCGTCTTTTTCGATCAATACAAT
GCTGGTGGTAACTATGAAGCCAATGTGATATTCTCTCCCGACTCATACATACCCAGATCA
TTGTCTCTCAATTTGACTGTTGATATGTTTGGAGAATCCATCAATCTGCTGGAGATAAAA
GCACGCGGTGAAGGCTTCGAGAGATACTTTGAAAATCTTTTCGGTAACGATGGGCCGCTA
AGCAAGAATAAAATAAACGACAAAATCAGCAAAATGCGCTTCTTCCGTTCAACAAACGAA
GCTGATGATATTAGGGAAAAAATTGATGATTTAGAATTCAATAATAATGCGCTGAAACAC
AGGTTCCCCACCGCCGAATTGGGGTTCAAAGTTTTTGGGAACGAGATATCTTTTTGGAGC
GCCGAAGGGGACGAGGAGATAAGGAAGTCTTTGGAGAGATTGAACCCCAAGTTGAGAATA
CTGGAGATATTATCGGGGAAGGAAATTTCCTACAACAAAGCGTCTCTCTTCCTAGACACG
ACCTTCTCAGTGCCAACGGGCTGCGGTCTGCCGCTTGGCATGAATCTCATGGGAACTAGT
TACGTAGACACAAAACTATCAGGGAACGTCGTTGATAAGTTTAGTCAATCTAGGAATTTG
GATTTCGAAGGCAAGATACGGCCTAGCGTTGCTGTGAACATAGCGGCTACAATGAGTGTG
TCGGCCGGTTCGCTGGCTAATAGCGGAGTGCGGTTGTCTTCCCGTCTGTACACAGCTACA
GCGCTGGAAGCGAAGCTATCAATACGCGGCCTAGGAGTTATAAGACTAGATTTGTCCCTA
CCTAGAGAAAAACAGGAGATATTTGCTGCCAAGTGA
Protein sequence:
MIIKKEVDSDTRHEWLMSMAMIPRPKIEMLKSMLELLQTQRNDQVISFTVSSMVHSYCKH
SRKALRECCEEEIPKQILEEFQDIVNEIIGKGVANAQREDRDNLVKALKALGNIGGFKQE
FADVLMNIIGDSLIPVPTRLTAIDAFRRTPCTETREYFLETYRADLVDVEVRIASYLQVM
KCPNLSTIRKIFHSLKKEPVNQVATFVWSHLNNLGQSSLPSRVEIQGLLSGNTVPQLEDS
PDFRMFSRNYEQSVFFDQYNAGGNYEANVIFSPDSYIPRSLSLNLTVDMFGESINLLEIK
ARGEGFERYFENLFGNDGPLSKNKINDKISKMRFFRSTNEADDIREKIDDLEFNNNALKH
RFPTAELGFKVFGNEISFWSAEGDEEIRKSLERLNPKLRILEILSGKEISYNKASLFLDT
TFSVPTGCGLPLGMNLMGTSYVDTKLSGNVVDKFSQSRNLDFEGKIRPSVAVNIAATMSV
SAGSLANSGVRLSSRLYTATALEAKLSIRGLGVIRLDLSLPREKQEIFAAK