| New model in OGS2.0 | DPOGS205519 |
|---|---|
| Genomic Position | scaffold2228:+ 12458-17899 |
| See gene structure | |
| CDS Length | 1812 |
| Paired RNAseq reads | 1515 |
| Single RNAseq reads | 3735 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000154 (2e-157) |
| Best Drosophila hit | CG30349 (1e-31) |
| Best Human hit | WD repeat-containing protein 43 (2e-38) |
| Best NR hit (blastp) | PREDICTED: hypothetical protein [Nasonia vitripennis] (4e-62) |
| Best NR hit (blastx) | PREDICTED: hypothetical protein [Nasonia vitripennis] (2e-62) |
| GeneOntology terms | GO:0005634 nucleus GO:0005730 nucleolus |
| InterPro families | IPR019782 WD40 repeat 2 IPR017986 WD40-repeat-containing domain IPR015943 WD40/YVTN repeat-like-containing domain IPR011046 WD40 repeat-like-containing domain IPR007148 Small-subunit processome, Utp12 |
| Orthology group | MCL11791 |
Nucleotide sequence:
ATGGCAGAGGCCGCCTTTTCGGAGGACGGGAAATATTATTCATTAATTACACAGGACGGT
AGATTGAGAATATGGGACACAGAAACTAATGTCCTCAAACAGGAGTATACTCCGGACCTC
CATTTAACATCACCCCCCTCGTGTTTACAGTGGATATCTGTCACCTCAAATACCAGTCCC
ACAAAAGGTGTCAGAAGAAAATCATTCAGTGGAGTCGAAACACAATGTATAGCATTAGGA
ACAGCTAGCGGAAAAATACTTATATACTCAGTGAGCGAGGCGCAAATAGAGACAGTTTTA
ACAGACAAAAACAACGCTATTCACAGCAAAGTACAAAGTTTGGATTGGCATAGAAAATAC
GGTCTATTCAGTTGCACCAGTGACAGTCATGTGTGGGAATGGGACTTGCAAAGTTCTTGT
GTTAGACATAAGTACAATATCCATGTATATAGTAAAAATAAACAGGGAAACAAGATCAGT
GCTATCAGGATCGTACCACACAATCAGAACACTCCGGCAAAATTCCTCATATCTTCGTCG
TGGCAGATACGTCTGTGGAGATTAATTGATTCCGAAGCCACTCTCATCAAATGTCTGGGG
CACAATGCTGCTCCGCGAGCATTACTAACCGTTGCCACGGTTAATAATAGCAGTTGGTTA
ATCGAAGGCTCTCAAACGGAACGCCTCCTATCATTCTGGGATGTCACGATCACCGAGGAA
AACTTGCCACAAGAAAACTCAGAGGAATCCACACCGTGTAAGAAACAAAGGAAGAAATCC
TTGACCTCAGCTACCGTACCCGTCCCAACATATAACTTTGTTTTGGAAGACGCTCCCAGG
ATTATAGATGTGGAACTTAAGGTGGAGAACGGAGCCACGAGGTTGTCCCTGGCAGCGGCC
ACGAGGAGCGGGGTTGTACATTACTATGGCCATTTGCTCAATGGAGCGTCACACAAACCA
GTGAAGCCGTCAGTGACTATCCAAGTCACGACCGAAGACGCTCAGCCGCTGCCCTTACAA
TGTGTCCAGCTACCGAAAACTGGTGACTTGCTGATTGGATACTGCAGTGGACCCGGTGTA
GTGTTTGAGAAAGTCATACCAGATTTGAAGACAAAAACTCAGGTCCTTATACGAGGTGAC
AAGTCAAAGGAAGATAAGAATGAAGTTGTTCCGAAAGAAAATGATCAAATAACTTATGTT
GAGCCGCTGGGTGGAGTTAGTAGGAAACGTGGCAATGTAGGAGGGAAGGTGGAGGTGACG
ATGGAATCCCGTTTGTCAAACCTGTCCCTGGATGTGAAGAGTCGGAGCAAAACAGCTGTT
AACCAGAACTTAACCAAACTTTTAATACAAGGATTACACTCCAGAGATAAGAATTTAATA
CTAACTGTACTTCAACGTAACGACCCAGCGGTGGCCCACAACACGATATCATCCCTCCCG
GTCAATTACATACCAGCTCTGTTGGAACAGTTAACAGATATGGCTACGAGGAAAACTAGC
CAGTGTTCATCTGTTTGCACCTGGCTATGTGCTGTTCTTCAGTGTCACTCGGCATCTCTT
CTGGCGACTTCGCCCCATCAGTCCGAACACCTCACAAAACTCCTGGCTATATTCACACAG
AGACGCTCCAACCTGTGTCAGCTGCTGAGTCTGAAGGGCCGGCTGGACCTCACCTCGTGT
AGGCGACTCGCTCCCGAAGGGGATTCGCATACGCTACTGCAATATGAAGACTCATCATCA
GACGAAGACGTTCCTCCCGAGGGCTACGAGTCCGACAGCCGGCAGTCCTGGGACGACGGC
GACACAGACTGA
Protein sequence:
MAEAAFSEDGKYYSLITQDGRLRIWDTETNVLKQEYTPDLHLTSPPSCLQWISVTSNTSP
TKGVRRKSFSGVETQCIALGTASGKILIYSVSEAQIETVLTDKNNAIHSKVQSLDWHRKY
GLFSCTSDSHVWEWDLQSSCVRHKYNIHVYSKNKQGNKISAIRIVPHNQNTPAKFLISSS
WQIRLWRLIDSEATLIKCLGHNAAPRALLTVATVNNSSWLIEGSQTERLLSFWDVTITEE
NLPQENSEESTPCKKQRKKSLTSATVPVPTYNFVLEDAPRIIDVELKVENGATRLSLAAA
TRSGVVHYYGHLLNGASHKPVKPSVTIQVTTEDAQPLPLQCVQLPKTGDLLIGYCSGPGV
VFEKVIPDLKTKTQVLIRGDKSKEDKNEVVPKENDQITYVEPLGGVSRKRGNVGGKVEVT
MESRLSNLSLDVKSRSKTAVNQNLTKLLIQGLHSRDKNLILTVLQRNDPAVAHNTISSLP
VNYIPALLEQLTDMATRKTSQCSSVCTWLCAVLQCHSASLLATSPHQSEHLTKLLAIFTQ
RRSNLCQLLSLKGRLDLTSCRRLAPEGDSHTLLQYEDSSSDEDVPPEGYESDSRQSWDDG
DTD