DPGLEAN03273 in OGS1.0

New model in OGS2.0DPOGS210900 
Genomic Positionscaffold260:+ 55423-71123
See gene structure
CDS Length606
Paired RNAseq reads  31
Single RNAseq reads  223
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA003079 (7e-41)
Best Drosophila hit  Sox21b (5e-54)
Best Human hittranscription factor SOX-21 (4e-40)
Best NR hit (blastp)  Sox21b [Tribolium castaneum] (4e-56)
Best NR hit (blastx)  Sox21b [Tribolium castaneum] (2e-55)
GeneOntology terms


  
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005634 nucleus
GO:0045449 regulation of transcription
GO:0008301 DNA bending activity
InterPro families
  
IPR000910 High mobility group, HMG1/HMG2
IPR009071 High mobility group, superfamily
Orthology groupMCL16200

Nucleotide sequence:

ATGTACACCCTTTCACAACTCGACTACCAAACGTCGATGAACTCTGCCGCTGGTGCTATG
TGCGATCGAGCTGGTTATGGTAGCACCATGAGCCACTTCCCCATGGGCCCAATGTCGGCC
ATGGGAGCCATCGGCACAATGGGAGCGATCTCGGCCATGAACGGCCAATCACACCAGAAG
AAATCCCAGGAGGAACACATCAAGCGACCCATGAACGCGTTCATGGTGTGGTCCAGATTA
CAAAGGAGGAAAATTGCCCAGGACAATCCAAAAATGCATAACTCGGAGATCTCAAAGAGA
TTAGGCGCTGAATGGAAGTTGCTCTCAGAAGACGAGAAGAGACCCTTCATTGATGAGGCG
AAGCGTTTGAGAGCCATGCACATGAAGGAACACCCAGACTATAAGTACAGACCGCGGAGG
AAGCCCAAGACTTTGAGGAAGGAAGGCTATCCCTACTCCATCCCCTATCCCAGTGTACCG
ATGGACGCCTTGAGAGCCGCATATTATGACGGTAGTTTGTTGAACGGAAGTGACCAATGG
CGTGCGCTGGCGGCTCCCCCTCCCCCGGGCCGAGCTGCTTCCGGTCGCGTGACGTCATTT
ACATGA

Protein sequence:

MYTLSQLDYQTSMNSAAGAMCDRAGYGSTMSHFPMGPMSAMGAIGTMGAISAMNGQSHQK
KSQEEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLSEDEKRPFIDEA
KRLRAMHMKEHPDYKYRPRRKPKTLRKEGYPYSIPYPSVPMDALRAAYYDGSLLNGSDQW
RALAAPPPPGRAASGRVTSFT