New model in OGS2.0 | DPOGS213440  |
---|---|
Genomic Position | scaffold1216:+ 36975-59193 |
See gene structure | |
CDS Length | 5229 |
Paired RNAseq reads   | 219 |
Single RNAseq reads   | 516 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA000181 (1e-174) |
Best Drosophila hit   | Dscam3, isoform C (2e-174) |
Best Human hit | Down syndrome cell adhesion molecule isoform CHD2-42 precursor (6e-125) |
Best NR hit (blastp)   | GF18608 [Drosophila ananassae] (0.0) |
Best NR hit (blastx)   | PREDICTED: similar to CG31190-PB, isoform B, partial [Apis mellifera] (0.0) |
GeneOntology terms    | GO:0007155 cell adhesion GO:0005886 plasma membrane |
InterPro families    | IPR007110 Immunoglobulin-like IPR003961 Fibronectin, type III IPR003598 Immunoglobulin subtype 2 IPR003599 Immunoglobulin subtype IPR013783 Immunoglobulin-like fold IPR008957 Fibronectin type III domain IPR013098 Immunoglobulin I-set |
Orthology group | MCL10049 |
Nucleotide sequence:
ATGATAGCGATAACGCTGGTGACGTCAGTCGCGTCAACAGACAAACGGCCACATTTCACC
GTGGAACCTCCACCACGCGTGTTATGGCCGGCCACAAGGGGTGCCCACGCGCTTTGTCGA
GCCTCAGGACACCCCACACCAGAAATCCACTGGGTGACTGCCGAAGGTCAGCTAATCACC
ACCATCCCTGGCTTAAGGCACGTGTTAGCGGATGGTAGGCTAGTGGTGGGTGCTCGAAGG
TCACTTGTAGATGCAGGTGGTGGTGGTAGCAGTTCCTTATTACGATGCAGGGCTTCCAAC
CGAGCTGGTGTCACACTGTCCAGACCCATGTTACTACAAGCAGTGGAAGACAGCGTCTTA
TCACATCTTGTGAGACAGCTAATGCCAGCGAAGGTCGGAGGTGCTGTTGTGCTCCGTTGT
GAATTGTCACCACAGTTGGGATTGGTAGACGTTACGTGGCTTCAAGATGGCTTGCCATTA
TCATCAGGATATATGGGAGCTGATACACGGTGGGTGGCTGGGGCTGGCTTGTTACTTGGC
TCGGATTTAACGCAGGCTGATATACAAGCGGAATATTCATGTTTGGCGCTTGATGTCCCC
AGCCCGTCTTTGAAACTTACAACAGATGATAGTAGTTGGCTGGAAAATATTGAAGTTAAT
TCTATTGAAGCTCGTATTGGAGATACAGTCTTAGTGCCATGTATTATAAGACATATCAAT
AAACACGCTATTATTTGGCAGCGACAGGAAGCAAACGGTGTGTGGATAACTGCTACTGAG
GGTGTTGTTCGTGGAGGTACACTTATTTTGCCCAATGTGCGCGCTCACCATGCGGTGCGA
TACGCTTGCACAGCGGGCACTGAAACCTCACCTCGTGTTATTGTACGTCTAGTTTTATAC
GAGCCTTTAACAGTTTCAGTCACTCCTAATCCACTGATGCTCGGTACTGGTGGTAGCGGT
AGTTTTAATTGCTCAGTTCATGGCGGCAGAGGTGGAGGGGTTACTGTAAGCTGGCAACAT
GAAGGTCGTCCATTGCACTCTCCTCAACCGCGACTAGCTTTAGGACCAGTTCGTTTACAC
CATGTCGGAATGTATCAGTGCACTGCGTTTGATCATTCGGATTCCGCTGTGGCTGGAGCT
GAATTAGTTATAGCTGACAGACCACCCAGATTGGTATCTACATTTAGTGAAGCAATAACA
CGCATTGGTCAAACTATTGCGTTTAGATGTGCAGCAACAGGAATTCCACCTCCTAGAATT
TTGTGGACTTTAGACAATAGACCGTTGCCAGCAGCACCCGAAAAATATAATGTCAACACT
AGAGCTGAAACAGTACCTGGAGGGGAAGAAGGAACGATAGTTTCTACTTTGAGTATAACT
ATTAGAAGTGCTGATGAAGGCGGTAGATATGGATGTAATGCCTCTAATTCTGGAGGATTT
CAAGCACATCACGCACGGCTCAATGTTTTTGGCCCTCCAAATATACGATATTTACCTCCA
ATGCACATCAAAACCGATAGCGATGTAACATTGTACTGTCCTTATTCGGGTTATCCGTTA
AAAGAGGTAGTCTGGCGTCGTGAAGACGGTTCATTATTGGATGGTCCTATTGAAAGCAAC
GATGAGAAAGGCATGTTGAGATTGACTTCAGTTAGAAATGCGGTATCAGGCAGTTATACT
TGCGAAGTAAGAGCTGAAAGCGGAGAACTTGCAAGAAGAACTGTTAGAATTGAAGTACAT
AAACCTCCTAAAATAGCGCCGTTCCAGTTCCCAGAAGAATTAGAGGTAGGCGGTAGTACA
CAGGCTACTTGCAGTTTAGTGTCTGGGGACAAACCGATTCAGTTTTCTTGGCATAAAGAT
AATTTACCTATTCCGTCAACATTGAAAGTTGAACAAAAAAATATGGACTTTTTTACAATA
TTAGTCATCCAAGACCTAAATTCAATGCATAGTGGAGAATATTCATGCAAAGCCACAAAC
GACTTTGGTTCCGTAAGCCATAGCGCATCTTTGATCGTTAAAGAGCCTCCGACTTGGGTG
TGGCGACCTCAGAATACTTCGGTGTCCGCCGGTGCAGCCGTTCTCCTCCCTTGTTCAGCT
AAAGGACAACCAATGCCTAGAATATCTTGGGAATTCACAACAGAAGGAGATAACTGGCGT
CATATTCTTTGGAGCCAAACTGAATCGGCAAGTGCCAGCGAGGGTTCTATTTTATCAGAT
GGTACTGTGTGGTTAAGAGCAGCGACACCAGAACATGAGGGCTGGTATCGTTGCACAGCT
CGTGTCCAGCATTCATTTCTTCATCATTCCTTTTTTCTTGACGTTAGGGAACCCCCAAAA
CTGACAAGAGGGGGTGCGGGAGAGACAAGATGGGTCGTTCGTGGTTCAACCGCAAGACTC
ACTTGCACTGTACGTGGAGAGCCAGAAATACATGTCCATTGGACTCATGATTCCAGACCA
CTTACGTTACACGGTTCAGGAGGGGTTGAAATGAGAGATCTGGGAAATGGTGCCATGACT
TCGGAAATAACCATAACTCATGCGGGTCCTGAGCATGCAGGTGATTATCGATGCATGGCG
AGGAATCTTTATGGAACTGACGAGCTGCTATTCAGGCTTTTTGTAAAAGAGAGACCAAAT
ACGCCAGAAGAGGTGCGAATATCAGAAGTATGGTCGCGTAAAGCTCGGGTTACATGGAGA
GTCGCTCGGGGGGCGTTTGTGTCCCACTACTCACTACAATACCGACCGCTCTCGATGGAT
CTTACGAACGCTCCGCTTAATGCTCCACTCCCCACTTTGATAGACACCTGGGATTCACCA
GAAGTTCTCAACATGACACTCGCTAATTCAGACTTACTTCATATTGCAACTGAAGGTCCA
AATAGAGCAGGTGCATCACTAGGGGGTCTTTTTCCCGATACGCGTTATGTCTTAAGACTG
GCTGCGTATAACGATGTTGGAGCTTCCTCATACACACAGCCCCTTCATTTTACTACACGT
GAAGAGGCGCCCGGAGGAGTTCCCCGTGACATCACGGTACGTGCGCTTCGAGCGAGAGAG
CTTCAAGTCACGTGGCAGCCACCTCCAAGAGAAACCTGGCATGGTACACTCTTAGGATAT
ACGATTCGGTGGTGGGAAGCTTCTGAAGAAGGCAAGGGCGCCAGTGATACAGGTTCTGAG
AGTGGAGCTAGCGCAGACGCCACAAGCACTACCCTCAGGGGTCTTAAATCGGCTACTAGA
TATGGGATCACCATACGGACGTACAACGCAGCCGGAACTGGTCCATTATCTCCGCCTCAT
TACCGACATACTCTGGAATCACCTCCAACCGGCGGTCCAGAAGATGTTTCCTGCATATCC
AGTAGTTCAACATCACTCCGCGTTTCATGGCGACCCCCAAATATTGATGTTAGAGGGGGC
CAAATTACACATTATACATTACAGTACACAAGAAGAGACTCTGATCCATTATTACCAACT
CAGGACGCTCATTTGAGAGTACAAGGCGAGGACACAACAATATCTCGTTTAACATCATAC
GCCGAGTATGAAATACGAGTTCGAGCTCACAACGCTGCTGGAGATGGCCCTCTCTCCGCA
CCGAAAGTTTGTAAGACCGATGAAGATGTGCCAAGTGCGCCTGGGGGCATGAAATTGATT
GCTCTCAGTGAACGGTCACTCAGAGCTTCCTGGCTGCCACCACTGGAGCCAAACGGAAAG
CTCACCCATTATTCGCTTTACGTCAAAGATCTATCAGGGACTCAAGAAGCCAACGTGACA
CGTGTAAACGCATGCACAGAGGGGGACAATATGGTAGAATGCATGAAATCCCTACGCGGC
TTACGCGCCGGAAGAACTTATGAGGCCTGGGTCAGAGCTGCTACAAGTGTCGGTGAAGGG
CCCCCATCTTCTGTTATTGCTTGTCAAACTAGTGCACTAGCTCCGGCTCGGATATCGTCA
TTTGGGGGTATTGCAGTTGGAGCAGCTGGTACGTCATTATCTCTTCGTTGTGTTGTTGGA
GGAGTTCCTCCACCCGCTAAACGATGGTTAAGAGGAGGCAATCCATTACATCCTCGAAAC
CCCTTTCATTTGGATGGCGACGCTCTATTAATACGAACATTGGAACTATCACATGCAGAC
AACTACACATGTGTGGCAGAAAACCCACATGGTTCTGATTCTGTCACTTGGAGACTATAT
GTTTTACGACCACCCACTCCTCCAAGTTTAGCCTTGCTAGAAGCTAAATCAAGGGAATTG
GAATTAGATCTTAGACCAGCTCCTAAAGTACAAGGTCATGCCTTATCAAAAGTATACACA
TTACATTGGCGACTGTCTGCACCAGAGGGTGAGTGGCGTATGCAATCTGCAAGTCCCGGA
CCCGTTATACTAACAGGACTCAGATGTGGCTCAGCGTATAGAGCATATGGGTCTGCTGGT
GGAGCACCGGGTGCTGAAATATCAATACGAACATCTGGGGGTCCCCCCACCGCACCACCA
GATACGAGATGGATTAGAACTAATGCGACTCATGCTAGATTTGATACAAGCACTTGGTCT
GATGGTGGCTGCGGACCAGTTACTTTGAAATTAGAATGGGCTGGTTCGGGAACTACTGGT
GCTAGAGACGTACCGGTTGGAGGTGAAGTAATTTTAGGAGGTTTGACTCCGGGATCAAGA
TATCGGGTCGCTGCTCGGGCATCAAATGAAGCTGGATGGACCAGAGAAGTGTATGAATTC
ACAACTACACCGGCTGAGGGTAGTTACACCGAGGAAGTTGATGCTCCTTTTCCTGCAACT
GCCGGCGAGCTAGCTTTGTTGTTAGCTCTTTGCGCAGCGTTATCTCTAGCAGCGCTTACT
ATATTAGCAATTCTTTTAAGGAGAAAAAGAGGTGAAGGTGCAGTTGCTCGTGTAATCACC
AGTGACAAACCAGGTTGTGGTACATACAGACCGCCCCCTCATCCAACACCCAAACTACCT
CCTGACCCACCAGATGTGTATGAAATCAGTCCATACGCGACGTTTGCGGGTGGTGACGGT
CTCGGTGTGGGTAGCGGTTCGCGGGCGTATACACTACAACTTCGTGCTTTAGCGCGACAC
GAAGACGATGCTGCTCCACCAGCCCATCCATCGTGTTGTGATGAGGAGACCTGTTTAGAT
GCCTGTGAGGCCCAACGACGACGCAGAAGACGACGTCACTACTGCCAAGATCATGGTACC
ATGACTTAA
Protein sequence:
MIAITLVTSVASTDKRPHFTVEPPPRVLWPATRGAHALCRASGHPTPEIHWVTAEGQLIT
TIPGLRHVLADGRLVVGARRSLVDAGGGGSSSLLRCRASNRAGVTLSRPMLLQAVEDSVL
SHLVRQLMPAKVGGAVVLRCELSPQLGLVDVTWLQDGLPLSSGYMGADTRWVAGAGLLLG
SDLTQADIQAEYSCLALDVPSPSLKLTTDDSSWLENIEVNSIEARIGDTVLVPCIIRHIN
KHAIIWQRQEANGVWITATEGVVRGGTLILPNVRAHHAVRYACTAGTETSPRVIVRLVLY
EPLTVSVTPNPLMLGTGGSGSFNCSVHGGRGGGVTVSWQHEGRPLHSPQPRLALGPVRLH
HVGMYQCTAFDHSDSAVAGAELVIADRPPRLVSTFSEAITRIGQTIAFRCAATGIPPPRI
LWTLDNRPLPAAPEKYNVNTRAETVPGGEEGTIVSTLSITIRSADEGGRYGCNASNSGGF
QAHHARLNVFGPPNIRYLPPMHIKTDSDVTLYCPYSGYPLKEVVWRREDGSLLDGPIESN
DEKGMLRLTSVRNAVSGSYTCEVRAESGELARRTVRIEVHKPPKIAPFQFPEELEVGGST
QATCSLVSGDKPIQFSWHKDNLPIPSTLKVEQKNMDFFTILVIQDLNSMHSGEYSCKATN
DFGSVSHSASLIVKEPPTWVWRPQNTSVSAGAAVLLPCSAKGQPMPRISWEFTTEGDNWR
HILWSQTESASASEGSILSDGTVWLRAATPEHEGWYRCTARVQHSFLHHSFFLDVREPPK
LTRGGAGETRWVVRGSTARLTCTVRGEPEIHVHWTHDSRPLTLHGSGGVEMRDLGNGAMT
SEITITHAGPEHAGDYRCMARNLYGTDELLFRLFVKERPNTPEEVRISEVWSRKARVTWR
VARGAFVSHYSLQYRPLSMDLTNAPLNAPLPTLIDTWDSPEVLNMTLANSDLLHIATEGP
NRAGASLGGLFPDTRYVLRLAAYNDVGASSYTQPLHFTTREEAPGGVPRDITVRALRARE
LQVTWQPPPRETWHGTLLGYTIRWWEASEEGKGASDTGSESGASADATSTTLRGLKSATR
YGITIRTYNAAGTGPLSPPHYRHTLESPPTGGPEDVSCISSSSTSLRVSWRPPNIDVRGG
QITHYTLQYTRRDSDPLLPTQDAHLRVQGEDTTISRLTSYAEYEIRVRAHNAAGDGPLSA
PKVCKTDEDVPSAPGGMKLIALSERSLRASWLPPLEPNGKLTHYSLYVKDLSGTQEANVT
RVNACTEGDNMVECMKSLRGLRAGRTYEAWVRAATSVGEGPPSSVIACQTSALAPARISS
FGGIAVGAAGTSLSLRCVVGGVPPPAKRWLRGGNPLHPRNPFHLDGDALLIRTLELSHAD
NYTCVAENPHGSDSVTWRLYVLRPPTPPSLALLEAKSRELELDLRPAPKVQGHALSKVYT
LHWRLSAPEGEWRMQSASPGPVILTGLRCGSAYRAYGSAGGAPGAEISIRTSGGPPTAPP
DTRWIRTNATHARFDTSTWSDGGCGPVTLKLEWAGSGTTGARDVPVGGEVILGGLTPGSR
YRVAARASNEAGWTREVYEFTTTPAEGSYTEEVDAPFPATAGELALLLALCAALSLAALT
ILAILLRRKRGEGAVARVITSDKPGCGTYRPPPHPTPKLPPDPPDVYEISPYATFAGGDG
LGVGSGSRAYTLQLRALARHEDDAAPPAHPSCCDEETCLDACEAQRRRRRRRHYCQDHGT
MT