| New model in OGS2.0 | DPOGS206321 |
|---|---|
| Genomic Position | scaffold621:- 4273-7509 |
| See gene structure | |
| CDS Length | 1482 |
| Paired RNAseq reads | 362 |
| Single RNAseq reads | 854 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA014137 (2e-86) |
| Best Drosophila hit | meiotic central spindle (6e-21) |
| Best Human hit | myeloid zinc finger 1 isoform 2 (2e-23) |
| Best NR hit (blastp) | myeloid zinc finger 1 [Rattus norvegicus] (3e-23) |
| Best NR hit (blastx) | PREDICTED: zinc finger protein 551-like [Danio rerio] (7e-27) |
| GeneOntology terms | GO:0003676 nucleic acid binding GO:0003700 sequence-specific DNA binding transcription factor activity GO:0005622 intracellular GO:0005634 nucleus GO:0006355 regulation of transcription, DNA-dependent GO:0008270 zinc ion binding GO:0046872 metal ion binding |
| InterPro families | IPR007087 Zinc finger, C2H2-type IPR015880 Zinc finger, C2H2-like IPR013087 Zinc finger, C2H2-type/integrase, DNA-binding |
| Orthology group | MCL40946 |
Nucleotide sequence:
ATGGTTATCTGTTATGTTTTGACAGCAGAGGAAATAAATATCTGCCAGGCAAAGGATTTA
CAGAAAAAGCCAATTTTTAGTAATATTCTTGCATTCAGACTGATTTTACTTGGAATAACA
GTAGAAAGGATGTTGGAAAATGGTAAAATGGAAGAAAATGATGATATGTTTATCGTGGTC
ATCGGGAACGAAAGTGATCAAACTTTTCCCGCGCCAATGCAAATTAAAGAGGAAGTTTTA
GAAGAAAGTGCAGTCGAAGATGTCGAGGATGTAATTAACAAAGCAAAAGAGTTCGGAGAA
GTAGTGGATGTAAAATGTCAGACTGTAAAAGAGGATTATGATAGAAATGTAGATATACAA
CACGACTTTGAATACGAATTTGTGGATGTGGATTTTATCAAATCTGAAAAAGACGAATCT
GATGAGATAAGTGATGAAGATGCTAGAACTATGAAGACAAGAATTAAGGGTTTAAAAATT
AAGAGACGGAAGCTTCTGAAACCATCCGAAAGACGGTCGTATATAAAGGAGCTGAAAGAA
CAGTTTCCAGAATTGCAAGATGATGAAGAGCTTCTCGTTAGATGTTTGGTTGAAATAATG
AAGACTACCAAGCCCCCGCCGCCGCCGCTGGATTATTATGTTATGGACGGAATAATGTTA
GAGTGTGTTATATGTGGAACTCATAATGAATCAATACCGGCAGCTGGTCGGCATTACCAG
GAGAAACACGGAGAGAGATATTTGTACTGCTATGCTTGTGGAGCTAACTTTAGAAGTACT
ACCAACCTATATAAGCATGAGAAGCGCTGCGAAGCTCCGCATATCAAGTTGGTACTACGT
GCGAGAGCCCTGTCCCTAGGGAGAAAGGGACGTTCCAGACCTTTCCTACCTAAATTTGAT
AACACTGAGCCGAGAAGGTACTCGAAGAATATTAGATACAACTGTGATGAATGTTCAGCG
TCTTTCTCAACAAAGTATTCTCTACAAGCACATCAGTTACTCCACAGAGGCCTGAGACCT
TATCGCTGTCCCGTGTGTCCCTGCGCCTACACCTCCAGCACTGTCTTGACTCGCCACATG
AAGAAGCACGGCTCGTCCCGGTTCGTGTGCGCTCACTGTGACCGCAGCTTCAACGTCAAG
GCGGCCCTCGTGGCGCACCTCAACACACATCTGCCCGAGAAGAAGTTCGCATGTCCTGAA
TGTCCGAAGCGGTATTCACAGAAGTCAGCTCTGATGTTGCACGAGAGACGCGTACACAGA
CGACTGCCGCCGCCCGCCGCCTGCAGGCTGTGTGACAACAGATACCCGAGGATGTCAGTA
CTGAAAGAGCACATGAGGAAAGTACACGGCATGGAGCTCATGACGAGAAAGATGTTCTTC
AAGAAGCTGCCGACGCTGTCCGACACTCAGTTGCATCAGGCCAAAGTGATTCTGAAACAC
GAAGTACACGAAAACGACTACTACATGTCCAAACATACATAA
Protein sequence:
MVICYVLTAEEINICQAKDLQKKPIFSNILAFRLILLGITVERMLENGKMEENDDMFIVV
IGNESDQTFPAPMQIKEEVLEESAVEDVEDVINKAKEFGEVVDVKCQTVKEDYDRNVDIQ
HDFEYEFVDVDFIKSEKDESDEISDEDARTMKTRIKGLKIKRRKLLKPSERRSYIKELKE
QFPELQDDEELLVRCLVEIMKTTKPPPPPLDYYVMDGIMLECVICGTHNESIPAAGRHYQ
EKHGERYLYCYACGANFRSTTNLYKHEKRCEAPHIKLVLRARALSLGRKGRSRPFLPKFD
NTEPRRYSKNIRYNCDECSASFSTKYSLQAHQLLHRGLRPYRCPVCPCAYTSSTVLTRHM
KKHGSSRFVCAHCDRSFNVKAALVAHLNTHLPEKKFACPECPKRYSQKSALMLHERRVHR
RLPPPAACRLCDNRYPRMSVLKEHMRKVHGMELMTRKMFFKKLPTLSDTQLHQAKVILKH
EVHENDYYMSKHT