New model in OGS2.0 | DPOGS206345  |
---|---|
Genomic Position | scaffold621:+ 17993-31435 |
See gene structure | |
CDS Length | 2349 |
Paired RNAseq reads   | 2081 |
Single RNAseq reads   | 5111 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA014103 (3e-08) |
Best Drosophila hit   | ND |
Best Human hit | ND |
Best NR hit (blastp)   | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] (6e-27) |
Best NR hit (blastx)   | hypothetical protein TcasGA2_TC012341 [Tribolium castaneum] (1e-08) |
GeneOntology terms   | ND |
InterPro families   | IPR003124 Actin-binding WH2 |
Orthology group | MCL18565 |
Nucleotide sequence:
ATGCCTCCTCCACCACCACCTGGGCCGCCGCCACCTCCCGGGCCACCGCCCCCGCCTTTG
TTCGGCGGTTCTAAGAGTAATGCACCAGATAATAGAGGTGCCTTACTAAATTCTATTAGG
CAAGGTACAAAATTAAAAAAAACTGTGACAGTGGACAAAAGTGGACCTTTTATTGCGGGG
AAGACGACAAGTGTGAGTAGCAGTTCCCCTGTGGGCAACGGTGTGAGAACTGGGGGCTCC
AACTTCAATGGAGGAGCCCCTCCAGGCTTGGGTGGACTTTTCGCAGGTGGCATGCCTAAG
CTAAAACCCACTGGCAAATTATCAGGCACAACACCGAATGGTCAAATCAGATCAGATCCA
CCAAGGTTTCCTCCACCACAACAAAGGTCTCCTGAGAAAACGAGATCGGAACACACAAGA
CAGTTTCCCGGACCTAATGTTGCTGCAATATCTGAAGCTCTCGCTTCAAGGGATGTCCCT
CCAACGAGAGAGGCTCCAACAAGGGAGGCACCTAGTAGGCCTTTGGTCAGGCGGCAACCG
AGTGAAATTAAAACCAGAGGTCCTCCTCCTGAACCACCCACACAGAAACAATTTATGCCT
TTGAGCTCGTCGGATTCCATTCTGACGTCGGGTTCCGTAGCTGAACGCAGCCGCAGTCTC
CAACAGGCTTCGGAACAGAGCCTGCCTCAGAACGTCGCCTCGACGTTACACAGGAATAGG
AGTTCTTTGCATTCAGGCTCACAGATGTCTTTGGGAGGTTCCATGACGTCACTATCCTCA
TCGCCTCAAACCCCGTCCCCGTCATCGTCGTTATCCACATCCGATCTTTCGGACCGTCCT
CGCGTGAGTCACGGGAAGCCCAACCTGGCACCAAAGCCGCCGGCGTTGGCCCCCGCCCCC
GATAGGCCTTCGCCACCGCCTAAGAAGTTGATAGTGAATGGCAAGCTGGCGGCACGAGCA
CAGAGCATGAGAGCACCAAGGTCCCCCCCGGTGTCCCCGCCGTCTCCCGCGAGTGCTCGC
CCCCCGCCGCCCTCCACCCAGCTGGTACACACCAAGAACCCAGCCTCACACTTCGGTACC
CTGCGCGCGCCCCGCGGCCTTCGTCCCCCCGGAGTGTGTCCCCCTCCTCCGCCGGGTGCT
CCGCCCCCGCCCCCCGTTCCGCCAGCGCGGGCTGCCTCCCTGGCTCAACCTCCGCCGCCG
CCGCCGCCACATCATCACCGGCACACCAGCACTAGCAGCGAGGACGCGCCGCCGCCGCCC
GTGCGAGGCTCCTCCATCCGCGCCGAGCTCGAGGCGCGGTTCGCTGAACTGTTCCACCCT
CAGACCAACTTCCCACAACCCGAACCCTTCCTGAGAGTCACCAAAGGATACAGCAGCGCC
ACACGGGGGGCGCCCGCCGCCGCGCCCGCGCCCGCCCCCGCTCGCACTGACAACGCACAC
CTAGCCCACGCCCACCCCGCTCATGCCCTGCTGGCCGTCGCCCACGCCCTCTTAGGTCCG
GCCAGCACGATCGCCAAAAACGCGCCAACGATTACCAAACAAGAGGAAGCGCCGGTCCAA
CAGATCGAGGCGCTCCAACCTAACGTGAACCTGCCCATAGAGCAGGTGTCTATGCCCGAG
GAGGACGTCAGCGACCTGAGAGATGTGGTCGACGCTATCAATAAGCTGTGCGACACGATG
AAGACCTCGTACGAGGAGTACGAGGACTGCTGCGACGTGAGACCAGTGGACGAGGAGCTG
ATACAACCACGAGAAGTCGTTATAAGGAAAGTTGATACACACCTCGCGGAACTATGGACT
GACGAGGCGCCAGGTGACGATGTAAACAGAAGTGAGGACGTTGTTGATTATATGAATAGG
GGATCCGAACAAGTCCAGGAAACACAGATCGTATCAGAACCGAGCGAGGATGAAACGGGC
CAGGTCACGCTACCTGGCGAAGACGATGTGAGTCGACCGACACGAAACGAAGACACGAAG
CGATCCGACGATAATAAGGAAACGAAGACGGCTCCATCAGATCACGCGGAGGAGACGGAG
GCGGTGGTGTCAGACTCCGAGCTGGTGACCGCCGAGCCGACGTGTGAGCCCACCAGTGAC
ATGTACTACACGGCCTCGTCCGAGGTGTCCCTGCTGTCGGACACGGACGCACAGGAGAGG
CTGTGTGTGAGCGACGACCCTGACATCAGACGCGACGACAGGAACGGCGTGATGGCCGGC
CACGTGGCCGCCATGAGGGAGCACTTCGAGAGCATGACGAGGACCAACACTCCTTGCCCC
GACCTGCTGAGGTCGGCGTCCCCTTCCTTCGAGATATTCAGAACTGTCACCAACTCGCCC
GATAACTAG
Protein sequence:
MPPPPPPGPPPPPGPPPPPLFGGSKSNAPDNRGALLNSIRQGTKLKKTVTVDKSGPFIAG
KTTSVSSSSPVGNGVRTGGSNFNGGAPPGLGGLFAGGMPKLKPTGKLSGTTPNGQIRSDP
PRFPPPQQRSPEKTRSEHTRQFPGPNVAAISEALASRDVPPTREAPTREAPSRPLVRRQP
SEIKTRGPPPEPPTQKQFMPLSSSDSILTSGSVAERSRSLQQASEQSLPQNVASTLHRNR
SSLHSGSQMSLGGSMTSLSSSPQTPSPSSSLSTSDLSDRPRVSHGKPNLAPKPPALAPAP
DRPSPPPKKLIVNGKLAARAQSMRAPRSPPVSPPSPASARPPPPSTQLVHTKNPASHFGT
LRAPRGLRPPGVCPPPPPGAPPPPPVPPARAASLAQPPPPPPPHHHRHTSTSSEDAPPPP
VRGSSIRAELEARFAELFHPQTNFPQPEPFLRVTKGYSSATRGAPAAAPAPAPARTDNAH
LAHAHPAHALLAVAHALLGPASTIAKNAPTITKQEEAPVQQIEALQPNVNLPIEQVSMPE
EDVSDLRDVVDAINKLCDTMKTSYEEYEDCCDVRPVDEELIQPREVVIRKVDTHLAELWT
DEAPGDDVNRSEDVVDYMNRGSEQVQETQIVSEPSEDETGQVTLPGEDDVSRPTRNEDTK
RSDDNKETKTAPSDHAEETEAVVSDSELVTAEPTCEPTSDMYYTASSEVSLLSDTDAQER
LCVSDDPDIRRDDRNGVMAGHVAAMREHFESMTRTNTPCPDLLRSASPSFEIFRTVTNSP
DN