| New model in OGS2.0 | DPOGS209868 |
|---|---|
| Genomic Position | scaffold10061:+ 70-3775 |
| See gene structure | |
| CDS Length | 630 |
| Paired RNAseq reads | 629 |
| Single RNAseq reads | 1846 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA004422 (3e-30) |
| Best Drosophila hit | barentsz, isoform A (4e-23) |
| Best Human hit | protein CASC3 (3e-08) |
| Best NR hit (blastp) | AGAP011399-PA [Anopheles gambiae str. PEST] (7e-25) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP011399-PA [Tribolium castaneum] (7e-33) |
| GeneOntology terms | GO:0007318 pole plasm protein localization GO:0005737 cytoplasm GO:0045450 bicoid mRNA localization GO:0005635 nuclear envelope GO:0008103 oocyte microtubule cytoskeleton polarization GO:0045451 pole plasm oskar mRNA localization |
| InterPro families | IPR018545 CASC3/Barentsz eIF4AIII binding |
| Orthology group | MCL23729 |
Nucleotide sequence:
TACATTCCAAAGAGGGGCACCTTCTACGAACACGACGATCGTACAGCGGCCAGCGGCGAG
GAAACAACGAACACCACATCAGAGACGGTCTCCGAGAAGAAGGAAGGGGTGGAACCTCCA
GCGGAGCGTAGAAGACCACCGAGGAAGGCAGACGCTGATAATAAGTGGGCTCACGACAAA
TACAACGAAAACGAACAGATTCCGAAGTCTCGCGACGAGCTGGTGGCTATATACGGCTAT
GATATAAGGAACGAAGACGCTCCGCCTCACGCCAGGAGGAACAGGAGATATGGCCGCGGC
CCTAACAAGTACACGAGAACGTGGGAGGATGAAGAGGCGTATCGTCGTCAACTGGCTCAC
AAGAAACCCCCCAGCCCCGCTGATTTCCCTGAACTTGGAGCCACGAACAAACCCGGACGG
AAGCCGAGGGCAAGGCCGCGTTCCAAGTCACAGCCGGCGTCGAACGAGTCGTCGGAAAAC
GGCAGGGAGTTGAGACGGAACGCCTCGATAAAGACGCCGAAACAGAAAGCGGTCAAACCG
AACAAAACTAACCACAAGCAGGCCGTCCAGGAGAATGTGGTCAAAATGGAGAACCTGACT
ATCACTACCCCAGTTAATAACGGCACGTAA
Protein sequence:
YIPKRGTFYEHDDRTAASGEETTNTTSETVSEKKEGVEPPAERRRPPRKADADNKWAHDK
YNENEQIPKSRDELVAIYGYDIRNEDAPPHARRNRRYGRGPNKYTRTWEDEEAYRRQLAH
KKPPSPADFPELGATNKPGRKPRARPRSKSQPASNESSENGRELRRNASIKTPKQKAVKP
NKTNHKQAVQENVVKMENLTITTPVNNGT