| New model in OGS2.0 | DPOGS211727 |
|---|---|
| Genomic Position | scaffold1748:+ 4562-20875 |
| See gene structure | |
| CDS Length | 2199 |
| Paired RNAseq reads | 4386 |
| Single RNAseq reads | 22949 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013974 (2e-11) |
| Best Drosophila hit | lingerer, isoform F (2e-11) |
| Best Human hit | ubiquitin-associated protein 2-like isoform a (7e-06) |
| Best NR hit (blastp) | lingerer, putative [Pediculus humanus corporis] (3e-18) |
| Best NR hit (blastx) | PREDICTED: similar to LD45430p [Nasonia vitripennis] (5e-12) |
| GeneOntology terms | GO:0003674 molecular_function GO:0005737 cytoplasm GO:0007620 copulation |
| InterPro families | IPR015940 Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote IPR009060 UBA-like IPR022166 Protein of unknown function DUF3697, ubiquitin-associated protein 2 |
| Orthology group | ND |
Nucleotide sequence:
ATGAGTTTGGGTGCTCGCGCCACCAAGGGTGGTGTGAAGAAAGACGGGAAGCAGGACAAA
GGAAAGGTGGCCGAGAAACCTGCGCCCAAGGAAAAGACTAAACCACAGGCAACCACAGAA
CAGCTAAGGATGGCCAACATGATTGACTGCAAGAGTGAAGACGCCTCCGATGTACGGAGA
ATGGTGACAGAGTTGATGGAAATGACCTGTCGCACCGAGGAGGAGGTGTGCTCGGCCCTT
CATGACTCAGACAACGACCTGCAGGCTGCCTGCAACCTGCTGCTGGAGGAGAGCCAGCGG
ATACAGGGCGAGTGGCAGACCAGCGAGAAGAAGAAGAAGAAACCTTCTCAGCCAGCCGGC
AATGGCGATGCTGAACGGGAGAGAGATGCTCGCAGCAGATCGGGGCCTCGATCACGTGGT
AACATTGATTCGTTCCCCACCACAGAGGATTGGGACAATGAGGAATGGTCGGGCTCTCTA
TCGGATACTAAGGTGTTTACTCCCAGCTCCAACGCACTTCCGGCGGAAGCCGAGCCGCCG
GCTGTTACGGAGGATTGGGAGTCTGGAGAGGCGAACGGCCGCGAACACATACCGACCTAC
ACATACCACAACACACACCAACACATACCGATACCATCGTCGGCGGTGGAGATGCCAGGT
GGTACTGAGACATCGAGCAATATGTTCATCGACGTACAGTTTGGAGCCCTGGAACCCGAC
GCCCTACACGAGCCTCCGCCCCCCGTGCAGGGGGCGCCGCCTCCCACCACCACGCAATCA
CCTACAACCAGCATACAGACTAACAAACAGGTCACGTCACAAGCTGACAGCCAGCCCGTA
CCAAGCCACGAGACGACGACGGAGGCGCCCAGCAATAGTTATCCTAATGCCAATAGTATG
TTAAGTGAGAGTATATCAGTAGTGGACCCTACACCCGCCAGCCAGCCGGTCACCTCGGAC
ACAGCGGTCACTAACAGTAGCTCGTTGGATAAGTTGTCGGCGTCAATGAAGCAGCTAGGC
GTGTCGGGGACGGCCAGCCCGGCCGCACAGGACTCGCACCGACATCACTACACACACCAC
CGACCGAAGTCTGTAGGTCAACAACAGAACGTGTACGCGCCTCACCACGTGTCGCACCAC
CCGCCCGTGTACGGAGCTAATGTGTACGCGCCGCAGTATGACAGTTCAGTGGCGTCCAGC
AACAGCTTAACGAGCACCTCCACGACACAGACGTCCACGGCGAAGGTTACCACAACCACA
GTGAGCAACGCGGCGAGTACGGGTGCGTCGTCAGCCACGAGCGCAGCGGGCGGCGGAGCG
GGAGCGGGCGCGGGCGCGGCGTACGCGGGCGGAGCGTTGTACGGCGGAGCGTACGCTTAC
GATGAACAAATCATGAGAGGAACGCTACCGCACCATATGGGCGGATACTACGAGGTCGGC
TACGGAGCTCGCGAAGGCACGTTCGGTCTGGGAGCGGGAGAGAGATTCGGTAGAACGGAC
GCCGCCTCACCACAACAGTACAGAGATTTTAACGTAGTTCCAAAGATCACTGTGATGAGC
GGCGAGCAGAAGCCGTTACATCCGAGACTGGTCCCGGCCGCCTTACCTCCCGGATACGCG
TACTTCTATCAGCCACCGCCTACGTCCTATCAGTACGGAGTTTATCCACCTTACGGTGGT
GGCTCAAGCGTGGGCGGCGTGGGAGGCGTAGGTGGCGTGGGCGGCGTAGGCGGAGTGGGC
GGCGTGGGCGGTGTGGGCGTGTCAGGAGGTGGAAAAGTATCCGCTTACTCACAACAACAA
CAACCGCCCTACGACGGCCAGGACACGTATAAACCAGGCGGGCCTTACACGGGTAGTGCG
AATAAGACGGGCGGAGGCGCCAATGATCTCACCAACACAATGTATGCCAAGACTCATGTA
GCTCTCAACAAGGTCAATGTAAGTCAGATTATATCATATATTATAAAAACAATGACTACA
GACAAAGTTACGAGAAGGCTGGTTTTCATAGCGGCACCCCGCCACCGTTCGGCGCTGGGT
CACACCTGTACATACCGGCCCCTCCGCACCACCATCCCCACCACCACGCTCCGCAACAAC
ACCAGGAGAGCGGATCCGCGGGTCGTTCCTCGTCTAAACCACAGTCGAGCAAGCCGACGT
ATTCCCAATCATACTGGACGCCGAACTAGGTGGCTATGA
Protein sequence:
MSLGARATKGGVKKDGKQDKGKVAEKPAPKEKTKPQATTEQLRMANMIDCKSEDASDVRR
MVTELMEMTCRTEEEVCSALHDSDNDLQAACNLLLEESQRIQGEWQTSEKKKKKPSQPAG
NGDAERERDARSRSGPRSRGNIDSFPTTEDWDNEEWSGSLSDTKVFTPSSNALPAEAEPP
AVTEDWESGEANGREHIPTYTYHNTHQHIPIPSSAVEMPGGTETSSNMFIDVQFGALEPD
ALHEPPPPVQGAPPPTTTQSPTTSIQTNKQVTSQADSQPVPSHETTTEAPSNSYPNANSM
LSESISVVDPTPASQPVTSDTAVTNSSSLDKLSASMKQLGVSGTASPAAQDSHRHHYTHH
RPKSVGQQQNVYAPHHVSHHPPVYGANVYAPQYDSSVASSNSLTSTSTTQTSTAKVTTTT
VSNAASTGASSATSAAGGGAGAGAGAAYAGGALYGGAYAYDEQIMRGTLPHHMGGYYEVG
YGAREGTFGLGAGERFGRTDAASPQQYRDFNVVPKITVMSGEQKPLHPRLVPAALPPGYA
YFYQPPPTSYQYGVYPPYGGGSSVGGVGGVGGVGGVGGVGGVGGVGVSGGGKVSAYSQQQ
QPPYDGQDTYKPGGPYTGSANKTGGGANDLTNTMYAKTHVALNKVNVSQIISYIIKTMTT
DKVTRRLVFIAAPRHRSALGHTCTYRPLRTTIPTTTLRNNTRRADPRVVPRLNHSRASRR
IPNHTGRRTRWL