| New model in OGS2.0 | DPOGS211729 |
|---|---|
| Genomic Position | scaffold1748:+ 53844-55052 |
| See gene structure | |
| CDS Length | 1209 |
| Paired RNAseq reads | 843 |
| Single RNAseq reads | 2034 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA013975 (3e-154) |
| Best Drosophila hit | CG17386 (2e-55) |
| Best Human hit | la-related protein 6 isoform 1 (2e-37) |
| Best NR hit (blastp) | acheron [Manduca sexta] (0.0) |
| Best NR hit (blastx) | acheron [Manduca sexta] (4e-175) |
| GeneOntology terms | GO:0006396 RNA processing GO:0030529 ribonucleoprotein complex GO:0003723 RNA binding GO:0005634 nucleus |
| InterPro families | IPR006630 RNA-binding protein Lupus La IPR011991 Winged helix-turn-helix transcription repressor DNA-binding IPR002344 Lupus La protein |
| Orthology group | MCL15856 |
Nucleotide sequence:
ATGGAGGTGACTCCTCCCAGCGCCATGCCTGAGCCGGACGAAGGCATCACCACTGATCGC
CGCCCTTCTACGGATGAACACGCAGATTTGTCGGACACAGCCTCCGAGACTGGCTCGGGG
GGGAAGGATTCGGGATGCGAAGTAGCCCCGGACCCTCAAGAACCACCATACACGCCACCA
GACGAAGAACTCGCCAATAGGATCGTTTCCCAAGTGGAGTTTTACTTCTCGGATGCCAAT
ATAACTAAAGATGCCTTCCTCTTAAAACACGTACGTCGTAATAAAGAAGGCTACGTCTCC
CTCAAGCTGATTTCGAGCTTCAAACGCGTCAAGCATCTAACCAAGGACTGGCGGGTGGTC
GCTGAGGCACTGAAAAGATCTACAAAGTTGGAAATTAACGAGCCGGGAACGAAGCTGCGA
CGAACTGATCCTTTACCAGCGTACGACGAAACTACTCCGTCTAGGACCGTAGTGGCGGTT
AGAATGCCGATAGATCGTCCTACAGTTGAGAATGTGTCGAGATTGTTTGCCAGTTGCGGT
GAGATCGCCCTGGTGCGGGTGCTTCGCCCCGGGAATCCGGTCCCCGCCGATGTTCGTCAA
TTCCTAAACAAGAATCCCAGTCTGGTGAATTGTGTGTGTGCTCTAGTTGAGTTTACCGAA
TCCGAGGCTGCTAGGGGCGCGCTGCGTCTGCAGACATCTGATGAAGAAGGTATGAAAGTG
TATGAATTGAATGGAGTCCCTCGCGAGCCGAAGAGGAAGGCACCGGCCCGTCGGCCTCCG
CCCCGCCGGCACGAGTGCGAATACTCATCCTGTTGCAGTGGATCCGAGCCTGAGTATGAG
TACAGGAATTATGGGACTCCGTTTTATAGACGGAACTCCAGCGGGTTCTTCGCCCCGCGT
CCGGCTGAAATACAGACTTGGGTGCCGAGACGACAGTCTACTTGCAGTCACAGTTCGGAT
TCAGGAGTTTCGTTCTTCTGTGGGTCCAGACGAGCATCTCAAGCGAGTACGGGGAGCGCG
AGCAGTGAGGGTTGGTTAGCGAGGAGGCTCTCGGGGTGTTCCTTGACGGGGACCGAGTGT
GGAGGGCGGAGGCTCTCCTGCACCCCCCGGTTCGAACCCCGCGCCCCCGTCGTCCCGGAC
GGCACAAGAGGCTTCCACGCCGCCTCTCGCCAACGACGGATATCAGACCTGGCGCTGTAT
TCGCGCTAG
Protein sequence:
MEVTPPSAMPEPDEGITTDRRPSTDEHADLSDTASETGSGGKDSGCEVAPDPQEPPYTPP
DEELANRIVSQVEFYFSDANITKDAFLLKHVRRNKEGYVSLKLISSFKRVKHLTKDWRVV
AEALKRSTKLEINEPGTKLRRTDPLPAYDETTPSRTVVAVRMPIDRPTVENVSRLFASCG
EIALVRVLRPGNPVPADVRQFLNKNPSLVNCVCALVEFTESEAARGALRLQTSDEEGMKV
YELNGVPREPKRKAPARRPPPRRHECEYSSCCSGSEPEYEYRNYGTPFYRRNSSGFFAPR
PAEIQTWVPRRQSTCSHSSDSGVSFFCGSRRASQASTGSASSEGWLARRLSGCSLTGTEC
GGRRLSCTPRFEPRAPVVPDGTRGFHAASRQRRISDLALYSR