| New model in OGS2.0 | DPOGS205159 |
|---|---|
| Genomic Position | scaffold140:- 106243-115390 |
| See gene structure | |
| CDS Length | 3537 |
| Paired RNAseq reads | 5650 |
| Single RNAseq reads | 13294 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001265 (6e-25) |
| Best Drosophila hit | eIF5B (0.0) |
| Best Human hit | eukaryotic translation initiation factor 5B (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to eIF5B CG10840-PB [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to AGAP004824-PA [Tribolium castaneum] (0.0) |
| GeneOntology terms | GO:0005829 cytosol GO:0003743 translation initiation factor activity GO:0006413 translational initiation GO:0005737 cytoplasm GO:0017151 DEAD/H-box RNA helicase binding GO:0003924 GTPase activity GO:0005525 GTP binding |
| InterPro families | IPR023115 Translation initiation factor IF- 2, domain 3 IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel IPR015760 Translation initiation factor IF- 2 IPR000795 Protein synthesis factor, GTP-binding IPR005225 Small GTP-binding protein IPR004161 Translation elongation factor EFTu/EF1A, domain 2 |
| Orthology group | MCL13848 |
Nucleotide sequence:
ATGGGAAAAGCTAAAAAGGGAAAGAAGGGTCAGACGACGGAGGATGGTGATAGTGACGTG
GAGACGACTACCATCGAAAACGTTAAACCGGCTCAAATCAAGGGGAAGAAGAAAACAAAT
GATTCAGAAGAGAGTGAGGATGAAAAACCAAAAGTTAAATCTAAACAACGGAAATCTATT
GATTCTGATGTAAAGGAAGTCACAAAAAACTTAAAGAATGTCTCAGTTTCAAACAAGTCT
CAAAAGAAGAAAGTAGTCAGTAGCGATGATGAATCTGATGATAATGAGCCAGTGGAGAAA
CCAAAGAAGAATAAGAAAAAGGAAGAAAAAAGTGCATTTTCATTGTTAGCTGTTGATTCT
GGTGATTCCGCACCCGAAGCCCCACCTTCATCGGATGATGAAAAACCAATTCAAAAAACA
CAGAAAAAGGCACCTGAAAAGAAAGAACCAGCGGGGAAAAAGGGCAAGAAGGCTAAGAGA
AGGAAAGATGACAGTGACGAGGATATAGATAAAGTACTGGCCGAACTCGAAATGGAATAT
GCCGGAATAAAAAAAGAGGAACCACCAGCGCCAGCAGCACAGGCTGAAAAAGCTCCAGAA
ACCGTAGAAGAAAAACCCAAAACAAAGAAGAAAGGCAAAAAAGAGGAACCTAAACCTGAA
CAAGCTGAAAATGAGGCTGAAGATAAGGATAGTGATGATGATGGTGAAATAACCATAAAG
ACAGCGGCTCAGAAAAAGAAAGAAAAGAAGGAGAGGGAGAAACAGAAGAAGTTAGAAGCT
AAGAAAAAAGAAAAAGAACAGGAATTTAAAAAGGAACCATCGGAACCGAAAACACCTGTT
CCACCTGGAAAAGATAAGACTGAATCTAAACCTACGGTAGAGAAAGATGAAGGAAAAGCT
GTGGTTGAAGATAAAGAAGCTGATGGCGATGCCCCAGCTATCGACGGAAAGAAAAAGAAA
AAAGGTGATAAGGGTGACAAGGATGATAAGGGAAAGAAAGGTCCAACGAAAAAGACTATT
GCTGCCATGCAAGAAGCTTTGAAGAAGGTGAAGGAAGAGGAGGAACGATTACAAAAAGAG
GAAGAAGAAAGAATACGGCAAGAAGAAGAAAGGGAAAGGCAACGGTTGGAAGCGATTAGA
TTAGAAAAAGAGCGTAAAGATAGAAAGAAACAGAAAGAAAAGGAGAGGAAAGAAAGACTT
AAGGCTGAAGGAAAACTGCTCACTCCGAAACAGAAAGCAGAGAAAGCCAGAGCTCAGGCT
TTGTTAGATTCATTAAAGGCCCAAGGTATAGAGATCGGATCGGCCGAAAAGAAACCACCG
AGGCCGGGTACCAGGATTAAGCCAACAAAATTGAAAACACAGATGTCTCAGGAAGAACCA
GCTACTCCGATAGAAGAAAAGAAGGTCGAATTGAAGACATCAGATGTTAAGGAAGATGCG
CCGAAGGTTGAAGAGAAGAAAGAGTCAGAAGACGATTCAGTGAAAGACGCCTGGGACGCG
GAGTCTTCGGAAGACGAGCCTGAACCGGAGAAAACGGAAATTAAGCAAGACGAAAAACAT
GAACCCGTTGAAGAAACGAAAGAGAAAGAAGAAGACGAAAGCTCAGAAGAAGAAGATGAC
AGCTCTGAAGAAGACTCTAGTTCAGAAGAAGATTCTGGTGATGAACAGATGACGGACGCA
CAGAAGAAACGGGAATTGGTTCTTAAGAGATTAGAGAAAAGAAAAGAAGAAAACGAGAAG
AACAAAGCGGACAATCCGTTGCGTGCGGCCGTCGTGTGTGTCTTGGGTCACGTGGACACT
GGGAAGACCAAGATATTGGACAAGCTCCGAAGAACAAACGTACAGGACGGCGAGGCTGGC
GGCATCACGCAACAAATAGGAGCAACTAACGTGCCCATAGAGAACATCAAGGAACAAACT
AAACATGTGAAAGGGGTGAATGAGATATCATTCAAGCTTCCCGGCCTGCTCATCATCGAC
ACTCCCGGCCACGAGTCCTTCAGTAACCTGAGGAACAGGGGATCGTCCCTTTGTGATATT
GCCATTCTTGTCGTGGACATCATGCACGGTTTGGAACCACAGACGATAGAGTCGATAAAT
CTGCTCAAACAGAAGAAAACTCCCTTCATAGTGGCGTTGAATAAGATCGACCGTCTGTAC
GACTGGCAGAGCGCGCAGCGGAAGGACGTCAGGGACATATTGAAGATGCAACAACCCAAC
ACCCAGCTGGAGTTCGAGAAACGAAGCAAAGATGTCATATTACAGTTCGCGGAACAGGGT
CTGAATGCTGCCTTGTTCTACTCAAACCCTGACCCTCGCTCCTACGTTTCCCTGGTGCCC
ACGTCAGCTGTCACAGGCGAGGGTATGGGCAACCTGCTGGCCATGATCGTGCAAGCCTGT
GAGGGACCCCTTCATAAGAGGCTCGTGTTCTCACAGCAGCTACTCGCTACTGTACTTGAG
GTCAAAGCGATCCCTGGTTTAGGAACCACCATAGACGCCATCTTGATCAATGGTACTTTG
AGGGAGGGGGACACCATGGTGCTGGCGGGTACTGATGGACCCATCGTCACTCAGATAAGA
TCACTGCTGATGCCGCAACCCATGAAGGAGTTGAGGGTTAAGAACGCGTATATTGAGCAC
AAAGAAGTGGTCGGGGCCCAGGGGGTGAAGATCGCCGCCAAGGAGTTGGAGAAAGCCATC
GCTGGACTTAATTTACTCGTTGCCCAAAAACCTGATGAAGTTGATGTCCTGAAGGAGGAA
GTGGCCCGCGAGTTGAAGTCTGCTCTATCATCCATCAAGTTGACGGAGCGAGGGGTCTAC
GTCCAGGCGTCGACGCTCGGCTCCCTTGAAGCCTTACTGGAGTTCCTCAGGACTAGCAAG
ATCCCGTACTCCGCCATAAGGATAGGTCCGGTGGTGAAGCGTGACGTCATGAAAGCCTCC
GCCATGTTGGAACACGACTCACAGTACGCCACCATACTGGCATTTGATGTCAAGATTGAA
CGAGATGCCCAGGAACTAGCAGACAACTTGGGCGTGAAGATATTTGCAGCTGATATTATA
TACCACCTGTTCGACAAGTTCACAGCCTACAGGGAAGAGTTGAAACAGAAGAAGAGAGAG
GAGTTCAAACACATCGCTGTGTTCCCTTGCAAGCTGAAGATCTTACCTCAGTTCGTGTTC
AATTCCCGGGACCCCATCGTGGCTGGTGTCATGGTGGAGGCTGGTATCGTTAAAGAGGGT
ACTCCAATATGTGTACCCAGCAAGGAGTTCGTAGAGCTGGGTATAGTGACGTCTATCGAG
GTGAATCACAAGCAGGTGGAGAGCGCCCGCAAGGGTCAGGAGGTGTGCATCAAGATAGAA
CCCATCCCCGGGGAGTCGCCCAAGATGTTCGGCAGACACTTCGACGAAACCGACATGATG
GTCAGCAAGTTGAGAGTACATTGTAGTGTGAGGTCTGTGACGTCATTCAAATCCAACATG
GCGGATGAGACTGTTTTACTCCTACAATGTCCCTATCAAAAGAGAGAACATTCATAA
Protein sequence:
MGKAKKGKKGQTTEDGDSDVETTTIENVKPAQIKGKKKTNDSEESEDEKPKVKSKQRKSI
DSDVKEVTKNLKNVSVSNKSQKKKVVSSDDESDDNEPVEKPKKNKKKEEKSAFSLLAVDS
GDSAPEAPPSSDDEKPIQKTQKKAPEKKEPAGKKGKKAKRRKDDSDEDIDKVLAELEMEY
AGIKKEEPPAPAAQAEKAPETVEEKPKTKKKGKKEEPKPEQAENEAEDKDSDDDGEITIK
TAAQKKKEKKEREKQKKLEAKKKEKEQEFKKEPSEPKTPVPPGKDKTESKPTVEKDEGKA
VVEDKEADGDAPAIDGKKKKKGDKGDKDDKGKKGPTKKTIAAMQEALKKVKEEEERLQKE
EEERIRQEEERERQRLEAIRLEKERKDRKKQKEKERKERLKAEGKLLTPKQKAEKARAQA
LLDSLKAQGIEIGSAEKKPPRPGTRIKPTKLKTQMSQEEPATPIEEKKVELKTSDVKEDA
PKVEEKKESEDDSVKDAWDAESSEDEPEPEKTEIKQDEKHEPVEETKEKEEDESSEEEDD
SSEEDSSSEEDSGDEQMTDAQKKRELVLKRLEKRKEENEKNKADNPLRAAVVCVLGHVDT
GKTKILDKLRRTNVQDGEAGGITQQIGATNVPIENIKEQTKHVKGVNEISFKLPGLLIID
TPGHESFSNLRNRGSSLCDIAILVVDIMHGLEPQTIESINLLKQKKTPFIVALNKIDRLY
DWQSAQRKDVRDILKMQQPNTQLEFEKRSKDVILQFAEQGLNAALFYSNPDPRSYVSLVP
TSAVTGEGMGNLLAMIVQACEGPLHKRLVFSQQLLATVLEVKAIPGLGTTIDAILINGTL
REGDTMVLAGTDGPIVTQIRSLLMPQPMKELRVKNAYIEHKEVVGAQGVKIAAKELEKAI
AGLNLLVAQKPDEVDVLKEEVARELKSALSSIKLTERGVYVQASTLGSLEALLEFLRTSK
IPYSAIRIGPVVKRDVMKASAMLEHDSQYATILAFDVKIERDAQELADNLGVKIFAADII
YHLFDKFTAYREELKQKKREEFKHIAVFPCKLKILPQFVFNSRDPIVAGVMVEAGIVKEG
TPICVPSKEFVELGIVTSIEVNHKQVESARKGQEVCIKIEPIPGESPKMFGRHFDETDMM
VSKLRVHCSVRSVTSFKSNMADETVLLLQCPYQKREHS