| New model in OGS2.0 | DPOGS209201 |
|---|---|
| Genomic Position | scaffold2106:- 3787-4551 |
| See gene structure | |
| CDS Length | 765 |
| Paired RNAseq reads | 303 |
| Single RNAseq reads | 1386 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001323 (4e-118) |
| Best Drosophila hit | CG31548 (3e-88) |
| Best Human hit | 17-beta-hydroxysteroid dehydrogenase 14 (3e-22) |
| Best NR hit (blastp) | short-chain dehydrogenease/reductase [Bombyx mori] (1e-132) |
| Best NR hit (blastx) | short-chain dehydrogenease/reductase [Bombyx mori] (2e-116) |
| GeneOntology terms | GO:0016491 oxidoreductase activity GO:0005488 binding GO:0055114 oxidation reduction |
| InterPro families | IPR016040 NAD(P)-binding domain IPR020904 Short-chain dehydrogenase/reductase, conserved site IPR002347 Glucose/ribitol dehydrogenase IPR002198 Short-chain dehydrogenase/reductase SDR |
| Orthology group | MCL11858 |
Nucleotide sequence:
ATGAACTTCGCGGGAAAAGTAGTTATTGTTACGGGCGCGAGTTCTGGTATTGGCGCCGCA
ACAGCTGTATTTTTATCAAAACTTGGTGCAAAATTATCTCTAATTGGAAGAAACGTGGAA
AATCTTCAAAAGATCAATAAAGATTGTGCTAAATCTACATCAACATTAGTTGTACCCGCC
GATTTGACGAAAGAAAATGACATTGAGAAAATAGTGAAGAACACAGTAGACCATTATGGA
CAAATCGATGTACTTATTAATAATGCCGGTATAATTGAAACTGGTACTATTGAAAATACT
TCTCTGGCTCAATATGATCGACTCATGAATACCAATGTCCGTTCCATTTACTACCTGACG
ATGTTGGCCGTGCCATATATTATTAAAACTAAGGGCAATATAGTTAATGTCTCAAGTGTA
AATGGTATCCGGTCCTTTCCTGGCGTGCTGGCCTACAATGTATCAAAGGCATCGGTGGAT
CAATTCACTCGCTGTGTAGCCCTGGAGTTAGCTCCAAAAGGCGTCCGAGTTAACTGTGTT
AATCCCGGTGTGATTCTTACTGAGCTCCAGAAGCGAGGAGGCTTAAGCGATGAACAGTAT
GCAGCATTTTTAGAGAGGAGCAAAGAAACACATGCATTAGGCCGACCGGGGAAACCTGAT
GAGGTTGCTGCCACTATAGCCTTTCTAGCCAGCGATTTAGCAAGTAATATAACAGGAGCC
AGTCTTCCAGTCGATGGTGGCCGTCACGCAATGTGTCCTCGTTAA
Protein sequence:
MNFAGKVVIVTGASSGIGAATAVFLSKLGAKLSLIGRNVENLQKINKDCAKSTSTLVVPA
DLTKENDIEKIVKNTVDHYGQIDVLINNAGIIETGTIENTSLAQYDRLMNTNVRSIYYLT
MLAVPYIIKTKGNIVNVSSVNGIRSFPGVLAYNVSKASVDQFTRCVALELAPKGVRVNCV
NPGVILTELQKRGGLSDEQYAAFLERSKETHALGRPGKPDEVAATIAFLASDLASNITGA
SLPVDGGRHAMCPR