| New model in OGS2.0 | DPOGS209136 |
|---|---|
| Genomic Position | scaffold2106:+ 5742-11183 |
| See gene structure | |
| CDS Length | 2049 |
| Paired RNAseq reads | 540 |
| Single RNAseq reads | 1578 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA001309 (5e-136) |
| Best Drosophila hit | CG3803 (3e-117) |
| Best Human hit | cytochrome c oxidase assembly protein COX15 homolog isoform 1 (4e-97) |
| Best NR hit (blastp) | AGAP001744-PA [Anopheles gambiae str. PEST] (8e-135) |
| Best NR hit (blastx) | AGAP001744-PA [Anopheles gambiae str. PEST] (8e-135) |
| GeneOntology terms | GO:0008535 respiratory chain complex IV assembly GO:0005743 mitochondrial inner membrane GO:0003824 catalytic activity |
| InterPro families | IPR003008 Tubulin/FtsZ, GTPase domain IPR009003 Peptidase cysteine/serine, trypsin-like IPR017975 Tubulin, conserved site IPR000217 Tubulin IPR002452 Alpha tubulin IPR003780 Heme A synthase/Protoheme IX farnesyltransferase |
| Orthology group | MCL13754 |
Nucleotide sequence:
ATGGTCCCTAGGGTCGTTATGGTTGACTTAGAACCTACACCTATAGATGAGATCAGAACA
GGAGCGTATAGGCAACTGTTTCATCCAACATCATTAATTACTGGAAAAGAAGATGCAGCT
AGTAATTTTGCACGAGGATATTTTGGTGTGGGTAGAGAGATGATAGATATTGCTCTAAAT
CGTGTAAGAATAGCGGCGGAAGACTGCAGTTGCCTCCAAGGTTTTATTATCTTCCGATCT
TTCGGAGGAGGTACAGGATCTGGATTCACTGCACTATTACTAGATAGTCTCACTAAAGAT
TATGGTAAACTTTCTAAAATTGAATACGCTATATATCCATCACCAAAAATATCGCCGGTA
ATAGTAGAGCCGTACAACGCAGTACTGACTGCCCACGCTTGTATGAACACCGAGGACGTA
TGTTTTATTTTCGACAACGAAGCTCTCTATGATATACTAGCAAGGCTTCTGGATGTACCG
AGGCCCACATATACAAATTTAAACAGACTTATCGCACAGATTGGTGTAAATAATCAACCA
CCGACAACCGTCCCTGGGGGCGACTTAGCAGCTCTTCAAAGAGCAGTCGCGATGGTGTCT
AATTCTTCAGCTGTTCGTACCGCTTGGGAACGATTGTGTAAAAAAATGTTGGGTATGGCG
AATTTATGTCGGTACTCTCAACTTGTAAAAGTTGCTCCGACCAAACTGCTAGGATCAAAT
TCGGGTGTTAGCCGCTTAGTTTCAAGGCAGCTCATTACACCGATAAGAAACAGCAACCAC
AAGCACACCATATACAAGGGGTTTCAGATACAGAATATAATAAAATCAAATCCAATAATA
TTAAGATTCTGTTCATCATCACAACCAAAGAGGTCTAAGCTTGTTGGCTACTGGTTACTG
GGATGCAGTGGGATGGTGTTTACTGCTGTTGTTTTAGGCGGAGTGACTCGACTCACTGAG
TCTGGGTTATCTATGGTCACATGGAAATTGTTAGGAGAGAAGTTACCAAGAACTGATGAG
GAGTGGGAGACGGAGTTCAAGAAATATCAGCAGTACCCGGAGTATATATATAAGAATCAT
TCACTGACACTGTCCGAGTTCAAATGGATCTGGTATATGGAGTATGCTCATAGGACGTGG
GGTCGACTCATAGGGGCCTCTGTCTTCATCCCGGCCGCTGTGTTCTGGGCTAAGGGCTGG
TTCGACAAGGCTATGAAGATAAGGGTGTCCGCATACTGCGCGCTCGTTGCTGCACAGGGT
CTTATGGGTTGGTACATGGTGAAGTCAGGTCTTGAAGACAGATTTCAAGGGCCGTCGGAC
GTTCCGCGCGTGTCCCAGTACCGCCTGGCCGCTCATCTCAGTCTCGCCTTCATTCTGTAC
TCGGGGCTACTGGCCGGAGCCCTGCGGGTGCTCCGCCCCTTCCCTAAGGGAGCTCTCGTG
AGGATCAAAGAGCTGGCCGCCGTCACCGGACTCGCGCATGCCGTTAAAGCTATGGCGTTC
TTCACGGCTGTTTCAGGAGCGTTCGTGGCCGGTCTAGACGCGGGATTGGTCTACAATTCA
TTCCCGAAGATGGGTGACAACTGGATCCCGGACGACATCCTGTCCTTCGCCCCCACCATC
AAGAACTTCACGGAGAACCCCACGACAGTTCAATTCGACCATCGGGTCCTTGGCACCAGC
ACATTGATAGCGGCCACCACACTGTGGCTGATGGCGAGGGGCAGGCCACTGTCCCCGGTG
GCGAGGAGGGTGGTCAATGGAGTGGGAGCCATGGCCTGGCTACAGGTGTGCCTGGGTATC
ATGACGTTGGTCCACTACGTGCCCACTCCGCTGGGCGCGTCTCACCAGGCCGGTTCCCTC
GTCCTACTGTCGCTGGCAATCTGGCTCACTCACGAGATCAAGCTACTCAAGTACATACCA
AAGTCGACCGAGATGAGATGCGAGGGATGTGGCACCAACCTTCACTGGTGTAGTGCTGAA
GAGAGCACACGCGTTTGTACAGCAACATATAAAGGATTTAGTGCTAAAGAGTCCCGATAT
TGCGTTTAA
Protein sequence:
MVPRVVMVDLEPTPIDEIRTGAYRQLFHPTSLITGKEDAASNFARGYFGVGREMIDIALN
RVRIAAEDCSCLQGFIIFRSFGGGTGSGFTALLLDSLTKDYGKLSKIEYAIYPSPKISPV
IVEPYNAVLTAHACMNTEDVCFIFDNEALYDILARLLDVPRPTYTNLNRLIAQIGVNNQP
PTTVPGGDLAALQRAVAMVSNSSAVRTAWERLCKKMLGMANLCRYSQLVKVAPTKLLGSN
SGVSRLVSRQLITPIRNSNHKHTIYKGFQIQNIIKSNPIILRFCSSSQPKRSKLVGYWLL
GCSGMVFTAVVLGGVTRLTESGLSMVTWKLLGEKLPRTDEEWETEFKKYQQYPEYIYKNH
SLTLSEFKWIWYMEYAHRTWGRLIGASVFIPAAVFWAKGWFDKAMKIRVSAYCALVAAQG
LMGWYMVKSGLEDRFQGPSDVPRVSQYRLAAHLSLAFILYSGLLAGALRVLRPFPKGALV
RIKELAAVTGLAHAVKAMAFFTAVSGAFVAGLDAGLVYNSFPKMGDNWIPDDILSFAPTI
KNFTENPTTVQFDHRVLGTSTLIAATTLWLMARGRPLSPVARRVVNGVGAMAWLQVCLGI
MTLVHYVPTPLGASHQAGSLVLLSLAIWLTHEIKLLKYIPKSTEMRCEGCGTNLHWCSAE
ESTRVCTATYKGFSAKESRYCV