New model in OGS2.0 | DPOGS209656  |
---|---|
Genomic Position | scaffold4089:- 5657-7555 |
See gene structure | |
CDS Length | 858 |
Paired RNAseq reads   | 248 |
Single RNAseq reads   | 1004 |
Migratory profiles | Query via corresponding ESTs |
Best Bmobyx hit | BGIBMGA008126 (3e-25) |
Best Drosophila hit   | cuticular protein 56F (1e-22) |
Best Human hit | ND |
Best NR hit (blastp)   | putative cuticle protein CPR151 [Bombyx mori] (2e-41) |
Best NR hit (blastx)   | putative cuticle protein CPR151 [Bombyx mori] (8e-46) |
GeneOntology terms    | GO:0008010 structural constituent of chitin-based larval cuticle GO:0005214 structural constituent of chitin-based cuticle |
InterPro families   | IPR000618 Insect cuticle protein |
Orthology group | MCL10599 |
Nucleotide sequence:
ATGTCATATTGTTTTCAGTGTTTCATAGTGTGCTCGTTACTCGTGGTGTCGTGTTTGGCG
GAGCCACCAGTTAATAACAGGTATCTTCCTCCACAAGCGAGGAACGCGTCTCCCTCTCAG
AGTTATGGTGTTCCCGGATTCAGTCAGAGACAGACTGAAGCTGTCTTCAGAGGACGTCCT
TCATCTGCCTACGGACCACCTGCAAGTATCCGGAAACCAAACTCTCAATACGGACTACCC
AAAACTCCTTCCTCTCAGTATGTAGCACCGAACAACCAATATCAAGGACCAAAACAAGCA
CCCACCGGCCAATATTTACCACCAACCAGCCAATACCAAGCTTCTGTGAATCAATATCCA
GCTCCGAGCCAATACCAAGCACCAAAGGCACAATACTTGCCACCTGTAAACCAATACCAA
GCACCTTCCACTCAATACGGTGTACCTAATCAGGCTAGACCCAATGGTCCCTCTCAAGAA
TATGGAGCTCCTGGATTTGAACGAAGTGGTAGTGACAGCAAATATGACAACCAGCAAAGC
AGACAGTACCTCCCTCCCAGTGCTCGAGGATATGATGATGGAAGCAGTGGAGAGCCTGCA
AACTACGACTTCGAATACATGGTCCAGGACGCTCCCTCTGGCAACGACTTTGGACACCGA
GAGTCACGACGAGGGGACCGCGCTGAGGGAGTCTACTACGTCGTCTTACCTGATGGAAGG
AAACAGACCGTAGAATATGAAGCCGACCAGGACGGTTTCAAGCCCAGGATCTCATACGAA
GACGTCGGCGCCGGATCAGGCTACGACAGTAGCAGACAAGCGGATTACAACAACGATAAT
ACCAACGGACCTTATTAG
Protein sequence:
MSYCFQCFIVCSLLVVSCLAEPPVNNRYLPPQARNASPSQSYGVPGFSQRQTEAVFRGRP
SSAYGPPASIRKPNSQYGLPKTPSSQYVAPNNQYQGPKQAPTGQYLPPTSQYQASVNQYP
APSQYQAPKAQYLPPVNQYQAPSTQYGVPNQARPNGPSQEYGAPGFERSGSDSKYDNQQS
RQYLPPSARGYDDGSSGEPANYDFEYMVQDAPSGNDFGHRESRRGDRAEGVYYVVLPDGR
KQTVEYEADQDGFKPRISYEDVGAGSGYDSSRQADYNNDNTNGPY