| New model in OGS2.0 | DPOGS212817 |
|---|---|
| Genomic Position | scaffold367:- 55110-75005 |
| See gene structure | |
| CDS Length | 768 |
| Paired RNAseq reads | 41 |
| Single RNAseq reads | 125 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000762 (6e-31) |
| Best Drosophila hit | scarecrow, isoform A (3e-73) |
| Best Human hit | homeobox protein Nkx-2.4 (3e-43) |
| Best NR hit (blastp) | GI23787 [Drosophila mojavensis] (2e-77) |
| Best NR hit (blastx) | GK10842 [Drosophila willistoni] (2e-75) |
| GeneOntology terms | GO:0005634 nucleus GO:0003677 DNA binding GO:0006355 regulation of transcription, DNA-dependent GO:0003700 sequence-specific DNA binding transcription factor activity GO:0043565 sequence-specific DNA binding |
| InterPro families | IPR017970 Homeobox, conserved site IPR001356 Homeobox IPR009057 Homeodomain-like IPR020479 Homeobox, eukaryotic IPR012287 Homeodomain-related |
| Orthology group | MCL11152 |
Nucleotide sequence:
ATGAACCCGCCGCCCGCACGGTCCAACTCGTCAGGCAGCAGCATCAACTCCCCCCTGGGG
CCGGCGGCGTCCTGCGGGATGGCCGGGAACCCTTACGCGGTGCCGCTGTACGGCGGGGCT
CCGGTCCAAGGTTACGGCTGCGCGCCCGCGGACCTCCCGCACTATGGGGACATGCGCGGC
GCGAGCTGGTACCCCGCCTCCAACGACCCCAGGTTTGCCATTTCCAGGCTGATGACCTCA
ACGTCGGGCGGTATGGGCCACGTCAACAACATGGGTGGACTGGCGGCCTGCGCTGGACCT
GATGCGAAGCCAATGCAGTTCCCACTAGCGCAGAGGCGTAAGAGAAGAGTACTGTTCACA
CAGGCACAGGTGTACGAGCTGGAGAGGAGGTTTAAGCAGCAGAAGTACCTGTCGGCGCCG
GAGAGGGAACACCTAGCGTCGCTCATACACCTCACGCCGACCCAGGTCAAAATTTGGTTC
CAAAATCACCGCTACAAATGCAAACGACAGGCGAAGGAGAAGGCGATGGCGGAACAGAAT
CAACACAATCAGTCGGCGTCTTCTCCGCGTCGTGTGGCGGTGCCAGTGCTGGTGAAGGAC
GGCAAGCCGTGCGGGTCGGGCGAGTCCTCGTCCCCGGCACACTGCGCCACCCCCACCAGC
TACCCGGCGCCCCAGCAGGCCGCCTGCAGCAACCTGTCGTACCGCCAGCCCGCCGCCTAC
CAGCAGCAGTGCTCCGGCTACCTGCCGCTGCAAGGACGAGCCTGGTAG
Protein sequence:
MNPPPARSNSSGSSINSPLGPAASCGMAGNPYAVPLYGGAPVQGYGCAPADLPHYGDMRG
ASWYPASNDPRFAISRLMTSTSGGMGHVNNMGGLAACAGPDAKPMQFPLAQRRKRRVLFT
QAQVYELERRFKQQKYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQAKEKAMAEQN
QHNQSASSPRRVAVPVLVKDGKPCGSGESSSPAHCATPTSYPAPQQAACSNLSYRQPAAY
QQQCSGYLPLQGRAW