| New model in OGS2.0 | DPOGS212864 |
|---|---|
| Genomic Position | scaffold367:+ 28314-32708 |
| See gene structure | |
| CDS Length | 2100 |
| Paired RNAseq reads | 5116 |
| Single RNAseq reads | 11597 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000808 (4e-168) |
| Best Drosophila hit | Rat1 (0.0) |
| Best Human hit | 5'-3' exoribonuclease 2 (0.0) |
| Best NR hit (blastp) | PREDICTED: similar to CG10354-PA [Apis mellifera] (0.0) |
| Best NR hit (blastx) | PREDICTED: similar to CG10354-PA [Apis mellifera] (0.0) |
| GeneOntology terms | GO:0004534 5'-3' exoribonuclease activity GO:0003676 nucleic acid binding GO:0000738 DNA catabolic process, exonucleolytic GO:0008409 5'-3' exonuclease activity GO:0005730 nucleolus |
| InterPro families | IPR017151 5'-3' exoribonuclease 2 IPR004859 Putative 5-3 exonuclease |
| Orthology group | MCL13731 |
Nucleotide sequence:
ATGGGAGTACCAGCATTCTTTCGATGGCTAAGTCGTAAATACCCTAGCGTTATTGTCGAA
TGTGTTGAACAGAGGCCAACCGACGTAGATGGCCAGCTCATATATGCAGACTCCTCATTA
CCAAATCCTAATGGGATCGAATTTGATAACCTATATTTGGATATGAATGGAATCATCCAT
CCCTGCACACATCCTGAAGATAAGCCGCCTCCCAAGGATGAAGACGAGATGATGGTGGCT
ATCTTCGAATGTATTGACAGGTTGTTTCGCATCGTAAGGCCGAGAAAACTGTTGTACATG
GCTATTGATGGAGTTGCACCTAGAGCTAAAATGAACCAACAAAGGTCTCGGCGTTTTAGA
GCGTCTAAAGAGACACAGGAAAAAATAGATGAGATAGCCCGGATCAGAAACGAGCTCCAA
GTCAAGGGGGCATACTTACCACCAGAGAGACCCAAAGAGGCACATTTTGACTCCAACTGT
ATCACTCCAGGAACGCCATTCATGGATCGGTTGAGCAAGTGCCTGCATTACTATATTCAT
GACAGATTAAACAATGACCCTGGCTGGAAGGGAGTCAAGGTTATACTATCGGATGCAAAT
GTGCCCGGGGAGGGCGAGCACAAAATAATGGATTACATCAGGAGACAAAGGGCCCAGCCA
GATCATGACCCCAACACTCAGCATGTGCTGTGCGGAGCTGATGCGGACCTCATCATGTTA
GGTCTGGCGACCCACGAGCCGAACTTCACCATAATCCGTGAGGAGTTCAAACCCAACAAG
CCCAGGCCATGTGATGTCTGTGGCCAGCTAGGTCATGAAATGAAGGAGTGTACAGGAACT
ACACCGGACGCCTCACTGGTGCGATCCGATCCCTCCTTCGGTAACCAGGACAGCTTCATC
TTCGTGAGGTTGACGGTACTGCGAGAGTATCTCGAGAAGGAGCTGAGCATGCCGAATCTT
CCGTTCAAGTACGACTTCGAGCGCGCCCTGGACGACTGGGTGTTCATGTGCTTCTTCGTG
GGGAACGACTTCCTGCCGCACCTGCCCTCGCTGGAGATACGGGAGGGCGCGGTGGACCGG
CTCGTCAACTTGTACAAGAAATGCGTCTACAAAACTAGGGGTTGGATCACGGACTCGGGC
GACGTGAACCTGGACCGGGTGCAGGTCATCATGGACGAACTGGGGCGCGTCGAGGACGAG
ATCTTTAGGCGGCGGCATCAGAACGAGCTCAGCTTTAAGGCGAGGGAAAAGAACAAGAAG
CAGCAGAAGATCAACTTTGAACTGCTGGAGAAGACGCAGTTCGCACCAGTGAAAGTGGGA
GAGGAGTCCAAAACAGTGGAGAACGCTCGCAAGGAGGCGGCCAACATCCGCCTGGCGGGG
ATGCAGGCTGTGGCGGAGGCGGAAAAGGAGCAGCGCGGCCAGAAGCGGTCGGCGGAGCAG
GCGGGGCTGGACGACGACGACGCTCATGATGAAGTGAGGCTCTGGGAGGAAGGCTTCAAA
GAGAGATACTACGAGAGCAAGTTCGAGGTGGCCAGGGACAACCTGGAGTTCAGGTACCGC
GTGGCGCTGCAGTACGTGCGCGGCCTCTGCTGGGTGCTCCGCTACTACTACCAGGGCTGC
GCCAGCTGGAAGTGGTACTTCCCGTATCACTACGCACCGTTCGCCTCCGACTTCGTCAAC
ATCCAGGGCCTGTCCACCAAGTTCGAGAGAGGCACGCAACCGTTCCGTCCCCTGGAGCAG
CTGATGGGCGTGTTCCCGGCCGCCAGCTCGCAGCACGTGCCTCGCCCCTGGGCCACGCTC
ATGTCGGACCCGTTCTCCCCCATCATCGACTTCTACCCCACGGACTTCAAGATAGACCTC
AACGGGAAGAAGTTCGCGTGGCAGGGGGTCGCCCTGCTGCCCTTCGTCGACGAGACCAGG
CTGTTCAAGGCCCTGGAGCCGTACTACGACGACCTCACACAGGCCGAGAGTCAGTATTGT
TGGACTCTACGTGGCGCCGGCCAACAAGAGCTACGAGTTCCTGTCGGCCCTGTACTCGGA
GGCCGGGGACGACCAGCACAGGCTCATACACGCGGACCAGAAGTACCCCTTCAGGTGTGA
Protein sequence:
MGVPAFFRWLSRKYPSVIVECVEQRPTDVDGQLIYADSSLPNPNGIEFDNLYLDMNGIIH
PCTHPEDKPPPKDEDEMMVAIFECIDRLFRIVRPRKLLYMAIDGVAPRAKMNQQRSRRFR
ASKETQEKIDEIARIRNELQVKGAYLPPERPKEAHFDSNCITPGTPFMDRLSKCLHYYIH
DRLNNDPGWKGVKVILSDANVPGEGEHKIMDYIRRQRAQPDHDPNTQHVLCGADADLIML
GLATHEPNFTIIREEFKPNKPRPCDVCGQLGHEMKECTGTTPDASLVRSDPSFGNQDSFI
FVRLTVLREYLEKELSMPNLPFKYDFERALDDWVFMCFFVGNDFLPHLPSLEIREGAVDR
LVNLYKKCVYKTRGWITDSGDVNLDRVQVIMDELGRVEDEIFRRRHQNELSFKAREKNKK
QQKINFELLEKTQFAPVKVGEESKTVENARKEAANIRLAGMQAVAEAEKEQRGQKRSAEQ
AGLDDDDAHDEVRLWEEGFKERYYESKFEVARDNLEFRYRVALQYVRGLCWVLRYYYQGC
ASWKWYFPYHYAPFASDFVNIQGLSTKFERGTQPFRPLEQLMGVFPAASSQHVPRPWATL
MSDPFSPIIDFYPTDFKIDLNGKKFAWQGVALLPFVDETRLFKALEPYYDDLTQAESQYC
WTLRGAGQQELRVPVGPVLGGRGRPAQAHTRGPEVPLQV