| Genomic Position | scaffold367:+ 32728-41756 |
|---|---|
| See gene structure | |
| CDS Length | 675 |
| Paired RNAseq reads | 985 |
| Single RNAseq reads | 3143 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA000809 (9e-36) |
| Best Drosophila hit | Rat1 (5e-12) |
| Best Human hit | 5'-3' exoribonuclease 2 (1e-10) |
| Best NR hit (blastp) | PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum] (2e-29) |
| Best NR hit (blastx) | PREDICTED: similar to CG10354 CG10354-PA [Tribolium castaneum] (2e-33) |
| GeneOntology terms | GO:0004534 5'-3' exoribonuclease activity GO:0005634 nucleus GO:0006353 transcription termination GO:0016049 cell growth GO:0005515 protein binding GO:0003676 nucleic acid binding GO:0008409 5'-3' exonuclease activity GO:0007283 spermatogenesis GO:0006397 mRNA processing GO:0046872 metal ion binding GO:0000738 DNA catabolic process, exonucleolytic GO:0045449 regulation of transcription GO:0005622 intracellular GO:0008270 zinc ion binding GO:0016070 RNA metabolic process GO:0005730 nucleolus GO:0016787 hydrolase activity GO:0006139 nucleobase, nucleoside, nucleotide and nucleic acid metabolic process |
| InterPro families | ND |
| Orthology group | MCL30933 |
Nucleotide sequence:
ATGCTCAGCGCGGACTGTGTGCGCCTCGGAGGCCAGCTACCGTCGCCAGTGGTGGGTCTG
GAGCCGGTGACGGACAACCGGGTGGTGTGTGTGAGGTACCAGGACCCGCAGTTCCCCGAG
GAGTTCGTGTTCCCGGCCAGGAGGCTGCGCGGGGCCGTCGACCCGCCCAGGGTGCTGAAG
CCAGGGAACCTCAGCCATCAGGAGAACAGGAACTGGCGTCCACAGATAGGAATGGTCCGC
TCGCACACGGTGGCGTCCCTGGAGGTGGCCGGCCACCGCATGCTGGGTCACCAGCTGTCC
CGGAACCCGCGCGCCGCCGGGCCGCCGTCGCAACACAATCGGTCGCAATCGTTCGGGCCT
TACCGTGGCGGATACGTGCCCAGTCAGGGTTACAACCAGGGCTACAATCGCTCCTACAAC
ACACAGGGGCAAGACAGAGGGTACAACCAGGACAGAGGGAACCACAACCAGGACAGAGGG
AACCACAACCAGGGGTACCGCCAGAACTACAACAGCAACCAGAACTACAGACAGAATCAA
GGTTACTCGCAGAATAAGTACCAGGGTGGGTACCAGAGGCAGGGGAACGACAGGCAGGGG
TACGGACAGGGGAATAACCAGAACCAAAGACCTTCCGGGTCGAGTCGGTATCAGGGAAAC
TCGACGTGGCGCTGA
Protein sequence:
MLSADCVRLGGQLPSPVVGLEPVTDNRVVCVRYQDPQFPEEFVFPARRLRGAVDPPRVLK
PGNLSHQENRNWRPQIGMVRSHTVASLEVAGHRMLGHQLSRNPRAAGPPSQHNRSQSFGP
YRGGYVPSQGYNQGYNRSYNTQGQDRGYNQDRGNHNQDRGNHNQGYRQNYNSNQNYRQNQ
GYSQNKYQGGYQRQGNDRQGYGQGNNQNQRPSGSSRYQGNSTWR