| New model in OGS2.0 | DPOGS213115 |
|---|---|
| Genomic Position | scaffold320:- 64701-67919 |
| See gene structure | |
| CDS Length | 669 |
| Paired RNAseq reads | 78 |
| Single RNAseq reads | 291 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007877 (1e-113) |
| Best Drosophila hit | mediator complex subunit 18, isoform A (2e-70) |
| Best Human hit | mediator of RNA polymerase II transcription subunit 18 (2e-52) |
| Best NR hit (blastp) | PREDICTED: similar to Mediator complex subunit 18 CG14802-PA, isoform A [Apis mellifera] (4e-89) |
| Best NR hit (blastx) | PREDICTED: similar to Mediator complex subunit 18 CG14802-PA, isoform A [Apis mellifera] (5e-85) |
| GeneOntology terms | GO:0016455 RNA polymerase II transcription mediator activity GO:0016592 mediator complex GO:0006366 transcription from RNA polymerase II promoter GO:0006357 regulation of transcription from RNA polymerase II promoter |
| InterPro families | IPR019095 Mediator complex, subunit Med18, metazoa/fungi |
| Orthology group | MCL13247 |
Nucleotide sequence:
ATGTCTGTTAACGCACCTCCTATTACGGCAACTGATAGCCTTTCACAAGCGCTTAAGGCA
AATATTATACCAAACCAAGAATATTTATTACAGGGTTCTGTGTTGGACTCGGCGGTAGAG
GTATTACTTCATCGTCTCCGCGGTTTATGTGACAACGTCGATGCCGGTCCTGAAACGTTC
GATGATCAGGAAGTTTGTTTTAGTTTACGAGATCCTAATCAACAGGCAGCACCTCTCATG
TTACGAGTACGGAAAGCTCTTGATGCAAGGGATATGCCGTTCCAGTTGCGATATATAGGC
CAGCCTGATCTGGGCGATAAGAATAGACCGACAGTTGTGCGCTCCAGCCTTGATATAGCC
TGCAGCGGCATGTTGATAGAGTTCCTCAATGAACTAGGATGCAGAATTGAATTTGAATAC
AGTGTTAAAGGTTATATGTTCAGGAAAGGGAGGATGAAGATAACAGTTGCGAAGGTGTTC
AAGATATCACAGAGTTCAATGCCCCCGGAGCCGATATCACAGAGCTATCTGGTGGAGCTA
TCGGTTTTGGCACCTCAAGGACAGGACGCTATCGGTGAAGACATGAGGGCGTTCGCTGAT
CAATTGCGACCTCTGGTACAATTGGACAAGATTGATTACAAACGACTCGGTCACATGTCG
GTTACATAG
Protein sequence:
MSVNAPPITATDSLSQALKANIIPNQEYLLQGSVLDSAVEVLLHRLRGLCDNVDAGPETF
DDQEVCFSLRDPNQQAAPLMLRVRKALDARDMPFQLRYIGQPDLGDKNRPTVVRSSLDIA
CSGMLIEFLNELGCRIEFEYSVKGYMFRKGRMKITVAKVFKISQSSMPPEPISQSYLVEL
SVLAPQGQDAIGEDMRAFADQLRPLVQLDKIDYKRLGHMSVT