| New model in OGS2.0 | DPOGS213082 |
|---|---|
| Genomic Position | scaffold320:+ 8799-11860 |
| See gene structure | |
| CDS Length | 894 |
| Paired RNAseq reads | 16281 |
| Single RNAseq reads | 65220 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | BGIBMGA007879 (1e-145) |
| Best Drosophila hit | ribosomal protein L5, isoform A (4e-132) |
| Best Human hit | 60S ribosomal protein L5 (5e-110) |
| Best NR hit (blastp) | ribosomal protein L5 [Manduca sexta] (4e-157) |
| Best NR hit (blastx) | ribosomal protein L5 [Manduca sexta] (3e-162) |
| GeneOntology terms | GO:0022625 cytosolic large ribosomal subunit GO:0003735 structural constituent of ribosome GO:0006412 translation GO:0008097 5S rRNA binding GO:0005515 protein binding |
| InterPro families | IPR005484 Ribosomal protein L18/L5 IPR005485 Ribosomal protein L5, eukaryotic/archaeal |
| Orthology group | MCL15706 |
Nucleotide sequence:
ATGGCTTTCGTGAAAGTGGTCAAGAACAAGCAATACTTTAAGCGTTACCAAGTTAAATTC
AAGAGGCGTCGCCAGGGAAAAACTGATTATTATGCACGTAAACGACTAATCGTTCAGGAC
AAGAACAAATACAACACTCCTAAATACCGCATCATTGTCCGTCTCTCAAACAAGGATGTG
ACCTGCCAGATTGCTTACTCTCGCATTGAGGGTGATCACATTGTGTGCGCAGCGTACTCA
CATGAATTACCTCGTTATGGTATCAAGGTGGGTTTGACCAACTATGCTGCAGCCTACTGC
ACTGGTCTTTTGGTAGCCAGACGTCTTCTCCAAAGGCTGGGCCTTGACTCCTTATATGCA
GGAGCCACCGAAGTGACTGGTGATGAGTTCAACGTAGAACCTGTAGACAATGGTCCTGGT
GCATTCAGATGTTACTTGGATGTTGGTCTTGCAAGAACTACCACCGGTGCTCGTGTGTTT
GGGGCCATGAAGGGTGCTGTTGATGGTGGCCTTAATGTTCCCCACTCCATTAAGAGATTC
CCTGGATTTGATGCCGAAGCAAAGAAATTCAATGCTGAGGTTCACAGGGCTCACATCTTT
GGTCTTCATGTGGCAGAATACATGAAAAATCTGGAACAGGAAGATGAAGATTCATTCAAG
AGACAATTTGGAAAGTACATCAAGCTCGGAGTCTCTGCTGATGCTATCGAGAGCCTGTAC
AAGAAAGCCCATGAGTTAATCCGTGCGGATCCTTCACACAAGAAGAAGGAGAGCAAGAAA
GACCCAGCTAAACAAAAACGCTGGAACAAGCGCAAGCTGACACTGGCTGAGAGGAAGAAC
AGGATTAAGCAGAAGAAGGCTTCTTTCATCAAGAGATTGCAGGCAGAAGCATAA
Protein sequence:
MAFVKVVKNKQYFKRYQVKFKRRRQGKTDYYARKRLIVQDKNKYNTPKYRIIVRLSNKDV
TCQIAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGLLVARRLLQRLGLDSLYA
GATEVTGDEFNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF
PGFDAEAKKFNAEVHRAHIFGLHVAEYMKNLEQEDEDSFKRQFGKYIKLGVSADAIESLY
KKAHELIRADPSHKKKESKKDPAKQKRWNKRKLTLAERKNRIKQKKASFIKRLQAEA