| New model in OGS2.0 | DPOGS213084 |
|---|---|
| Genomic Position | scaffold320:+ 32729-34441 |
| See gene structure | |
| CDS Length | 1041 |
| Paired RNAseq reads | 109 |
| Single RNAseq reads | 324 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | torp4a (2e-48) |
| Best Human hit | torsin-1B precursor (1e-47) |
| Best NR hit (blastp) | PREDICTED: similar to Torsin family protein [Tribolium castaneum] (1e-62) |
| Best NR hit (blastx) | PREDICTED: similar to Torsin family protein [Tribolium castaneum] (5e-61) |
| GeneOntology terms | GO:0000166 nucleotide binding GO:0005524 ATP binding GO:0005737 cytoplasm GO:0005783 endoplasmic reticulum GO:0017111 nucleoside-triphosphatase activity GO:0051085 chaperone mediated protein folding requiring cofactor |
| InterPro families | IPR010448 Torsin IPR001270 Chaperonin ClpA/B IPR003593 ATPase, AAA+ type, core |
| Orthology group | MCL15313 |
Nucleotide sequence:
ATGAACATAAAGGGCTGTTTATTTTTTATATTACAATTAAAAGTTGTAAGTTCCGAATTA
GTTACATCTCTGATCATTGGTACTACTGCAGTTAGTGGTTTTTTTGGTTGGGATTATATT
AAGTCAAACACATATTGTCGTTATGTTGAATGCTGTAACGATAACTACGTTAATTTCGAT
ATAGAAAAACTTGAGCAATCGTTAAAGAATCAGCTGTTTGGTCAACCACTAGTCAACGAA
CTACCAAAAATATTAAAAGCACATAAAGAAAGTTTAAAGGATAAGACACAAAAGAACAAG
AAAGCCTTGGTATTAAGTTTACATGGGTGGTCTGGTGTGGGCAAAAATTATGCTACAACC
TTTATAGCGGAAGCAATATTTAAGAAAGGTATGAAGAGCCAGTTTGTAAAAGTTTTCATG
GGCAAAAAAGATTTTGACTGTTCCAATCTTCAAGAATCTCAAAGGAAATTAATTAATGAG
GTGAATAACATTGTTAAAAAATGTTCGACATCACTCATTATATTTGATGAAATTCATGAA
ATGTGCCCTACGATTCTGGATTCAATAAAACCAATGCTTGACCATCACCATGAAGTAGAT
GGTGTGGATTATAGGAATGCGATTTTCATATTTATATCGAATATTGGTGGTAAAGAAATC
GCAACAAGTCTACTGGACCTGTATAGTCAAGGAATCACGAGGAACAATGTGGAATTTTAC
AATTTTGAATCAATCATAAGAAGAACCGCTTATAATACTGGTGGATTTGAAAAATCCTTA
ACAATTGCTCAGCATCTAATCGATCATTATATCCCATTCTTACCATTGGAACAACATCAT
GTCCAGATGTGTGCATCAGCAGAGTTCAGGGCTCACGGCATATATAATCCATCAGACGAT
ATGATGTCTGATGCATTGTCAGTAATTACCTATGGACCGTCCGAAGAACAACCGATATTT
GCAAATAATGGTTGTAAAAGATTTACAAAGCAAATACCGTACATTATACAAAAACACAAA
CAAAAGAATGATGAATTATAG
Protein sequence:
MNIKGCLFFILQLKVVSSELVTSLIIGTTAVSGFFGWDYIKSNTYCRYVECCNDNYVNFD
IEKLEQSLKNQLFGQPLVNELPKILKAHKESLKDKTQKNKKALVLSLHGWSGVGKNYATT
FIAEAIFKKGMKSQFVKVFMGKKDFDCSNLQESQRKLINEVNNIVKKCSTSLIIFDEIHE
MCPTILDSIKPMLDHHHEVDGVDYRNAIFIFISNIGGKEIATSLLDLYSQGITRNNVEFY
NFESIIRRTAYNTGGFEKSLTIAQHLIDHYIPFLPLEQHHVQMCASAEFRAHGIYNPSDD
MMSDALSVITYGPSEEQPIFANNGCKRFTKQIPYIIQKHKQKNDEL