| New model in OGS2.0 | DPOGS213085 |
|---|---|
| Genomic Position | scaffold320:+ 36753-37727 |
| See gene structure | |
| CDS Length | 711 |
| Paired RNAseq reads | 140 |
| Single RNAseq reads | 743 |
| Migratory profiles | Query via corresponding ESTs |
| Best Bmobyx hit | ND |
| Best Drosophila hit | CG3527 (6e-87) |
| Best Human hit | probable ribosome biogenesis protein NEP1 (1e-81) |
| Best NR hit (blastp) | PREDICTED: similar to CG3527-PA [Apis mellifera] (1e-107) |
| Best NR hit (blastx) | PREDICTED: similar to CG3527-PA [Apis mellifera] (1e-102) |
| GeneOntology terms | GO:0005730 nucleolus GO:0006364 rRNA processing GO:0042274 ribosomal small subunit biogenesis |
| InterPro families | IPR005304 Ribosomal biogenesis, methyltransferase, EMG1/NEP1 |
| Orthology group | MCL17057 |
Nucleotide sequence:
ATGGGCAAAAAAAGGAAACATGAAGCAAATAACGACGATTTCGAATTTGACCCTATTCCT
CGACATTTGGTTACTTCACATATAAAAAAACAGGAAAAACGTTTAATTGTTATTCTTGAA
AACGCTCATTTGGAAACAGTTAAAAGTGGAAACAGCTTTGAATTACTGAATTGTGATGAT
CATGGTCATATCTTGAGGAAAAATGACAGAGATCCCGGGTCATGCCGACCTGATATTGCC
CACCAGTCTCTTCTTATGCTCATGGATTCCCCTCTCAATAGGGCAGGACTACTGCAAGTT
TACATTCACACAGAGAAAAATGTACTCATAGAGATCAACCCACAAACAAGAATTCCTAGA
ACATTCAAAAGATTTGCTGGTTTAATGGTTCAACTACTTCACAAATTTGCGATCAGAGCG
TCAGATGGACCAATGAAGCTGTTAAAAGTCATTAAGAATCCAATAACATCACACTTGCCT
GTTGGTGTAAAGAAAATTACAATGTCATTTAGCTCAAAAATGGTGAAAAATTGTAGGGAG
TTAGTACCTCAGGATGAGCCTATTGTTTTAATAGTAGGGGCTATGGCACACGGAAAGGTA
GAAGTAGATTATTCGGAAGATGTTATATCTATAAGTAACTACCCTCTGTCTGCTGCATTA
ACTTGTGCGAAGGTGTGCTCCGCATTTGAAGAAGTATGGGGAGTTGTTTGA
Protein sequence:
MGKKRKHEANNDDFEFDPIPRHLVTSHIKKQEKRLIVILENAHLETVKSGNSFELLNCDD
HGHILRKNDRDPGSCRPDIAHQSLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPR
TFKRFAGLMVQLLHKFAIRASDGPMKLLKVIKNPITSHLPVGVKKITMSFSSKMVKNCRE
LVPQDEPIVLIVGAMAHGKVEVDYSEDVISISNYPLSAALTCAKVCSAFEEVWGVV