DPGLEAN03401 in OGS1.0

New model in OGS2.0DPOGS213088 
Genomic Positionscaffold320:+ 68555-70493
See gene structure
CDS Length900
Paired RNAseq reads  292
Single RNAseq reads  821
Migratory profilesQuery via corresponding ESTs
Best Bmobyx hitBGIBMGA007698 (4e-13)
Best Drosophila hit  Rrp4 (3e-99)
Best Human hitexosome complex exonuclease RRP4 (1e-85)
Best NR hit (blastp)  exosome complex exonuclease RRP4 [Culex quinquefasciatus] (3e-110)
Best NR hit (blastx)  exosome complex exonuclease RRP4 [Culex quinquefasciatus] (1e-105)
GeneOntology terms





  
GO:0000176 nuclear exosome (RNase complex)
GO:0006397 mRNA processing
GO:0000175 3'-5'-exoribonuclease activity
GO:0000177 cytoplasmic exosome (RNase complex)
GO:0003723 RNA binding
GO:0005652 nuclear lamina
GO:0005737 cytoplasm
InterPro families  IPR003029 Ribosomal protein S1, RNA-binding domain
Orthology groupMCL15467

Nucleotide sequence:

ATGACTGGCCATGTGTCTATAAGATTAGCATCGGAACGAGTAAACCATTGTGTTCCTTGT
CCAAATGAATTACCACGGTTTTATACACCGGGAGAGGTTATAACTGGCATGCAAGACTTT
ATGCGTGGCCATGGAACATATGCAGAAGATGATTCCCTCAAGTCATCAGTTGCTGGTGTA
ATGCAAAAAGTAAACAAATTAATATGTGTTCGACCATTAAAAAGTAGATATGTTGGAGAA
ATAGGTGATGTTATTGTAGGACGTGTTCTTGAAGTTCAACAAAAGAGATGGAAAGTAGAG
ACCAACTCTCGTTTAGATTCCATTTTACAATTGTCATCTGTAAACTTACCAGGAGGAGAA
TTGCGTAGAAGATCAGCTGAAGATGAACAAATGATGAGGAAACATTTACAAGAAGGAGAC
CTCATAAGTGCTGAAGTTCAAAGTGTTTTTTCTGATGGTTCTCTGTCCTTACACACAAGA
AGTTTGAAATATGGCAAGTTATCACAAGGTGTCCTAGTTAAAGTATTTCCGTCATTGATT
AAGCGAAGAAAGAATCACTTCCATAACTTGCCCTGCGGTGTTTCAATAATAATAGGAAAC
AACGGTTATATATGGATAAGTCCTCACAAACAAGACGTTATACTGGAGGACAACCATGAT
GAAATAGAGAACTACGACCATCAAGCTGTTAAAAGATCGGACAGAGAGATTATAGCAAGA
GTTAAGAACTGTATCAGCGCACTGGTGGCCTCGAAGATGATGCTAGACGATACAAGTATT
ATGTTTGCATTTGAACAGAGCCTCAAATATGATAATGTGAAGGAACTCTTGGATCCAGAA
GCCATGTTGGATGTAGCGTTCCTTACACAACACATGCTAAATGATATTACTGAAGACTAG

Protein sequence:

MTGHVSIRLASERVNHCVPCPNELPRFYTPGEVITGMQDFMRGHGTYAEDDSLKSSVAGV
MQKVNKLICVRPLKSRYVGEIGDVIVGRVLEVQQKRWKVETNSRLDSILQLSSVNLPGGE
LRRRSAEDEQMMRKHLQEGDLISAEVQSVFSDGSLSLHTRSLKYGKLSQGVLVKVFPSLI
KRRKNHFHNLPCGVSIIIGNNGYIWISPHKQDVILEDNHDEIENYDHQAVKRSDREIIAR
VKNCISALVASKMMLDDTSIMFAFEQSLKYDNVKELLDPEAMLDVAFLTQHMLNDITED